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Aliases for GXYLT1P3 Gene

Aliases for GXYLT1P3 Gene

  • Glucoside Xylosyltransferase 1 Pseudogene 3 2 3 5

External Ids for GXYLT1P3 Gene

Summaries for GXYLT1P3 Gene

GeneCards Summary for GXYLT1P3 Gene

GXYLT1P3 (Glucoside Xylosyltransferase 1 Pseudogene 3) is a Pseudogene.

Additional gene information for GXYLT1P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GXYLT1P3 Gene

Genomics for GXYLT1P3 Gene

Genomic Locations for GXYLT1P3 Gene

Genomic Locations for GXYLT1P3 Gene
chr9:40,348,499-40,353,658
(GRCh38/hg38)
Size:
5,160 bases
Orientation:
Plus strand
chr9:42,493,617-42,494,809
(GRCh37/hg19)
Size:
1,193 bases
Orientation:
Plus strand

Genomic View for GXYLT1P3 Gene

Genes around GXYLT1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GXYLT1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GXYLT1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GXYLT1P3 Gene

No data available for GeneHancer (GH) Regulatory Elements for GXYLT1P3 Gene

Proteins for GXYLT1P3 Gene

Post-translational modifications for GXYLT1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GXYLT1P3 Gene

Domains & Families for GXYLT1P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GXYLT1P3 Gene

Function for GXYLT1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GXYLT1P3 Gene

Localization for GXYLT1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GXYLT1P3 Gene

Pathways & Interactions for GXYLT1P3 Gene

PathCards logo

SuperPathways for GXYLT1P3 Gene

No Data Available

Interacting Proteins for GXYLT1P3 Gene

Gene Ontology (GO) - Biological Process for GXYLT1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GXYLT1P3 Gene

Drugs & Compounds for GXYLT1P3 Gene

No Compound Related Data Available

Transcripts for GXYLT1P3 Gene

mRNA/cDNA for GXYLT1P3 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GXYLT1P3 Gene

No ASD Table

Relevant External Links for GXYLT1P3 Gene

GeneLoc Exon Structure for
GXYLT1P3
ECgene alternative splicing isoforms for
GXYLT1P3

Expression for GXYLT1P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of GXYLT1P3 Gene:

GXYLT1P3
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GXYLT1P3 Gene

Orthologs for GXYLT1P3 Gene

Evolution for GXYLT1P3 Gene

ENSEMBL:
Gene Tree for GXYLT1P3 (if available)
TreeFam:
Gene Tree for GXYLT1P3 (if available)

No data available for Orthologs for GXYLT1P3 Gene

Paralogs for GXYLT1P3 Gene

No data available for Paralogs for GXYLT1P3 Gene

Variants for GXYLT1P3 Gene

Sequence variations from dbSNP and Humsavar for GXYLT1P3 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1007222088 -- 40,350,893(+) A/G intron_variant
rs1010109578 -- 40,349,923(+) T/A non_coding_transcript_variant
rs1017929222 -- 40,352,705(+) T/G non_coding_transcript_variant
rs1021953904 -- 40,349,942(+) A/G non_coding_transcript_variant
rs1025420747 -- 40,353,620(+) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for GXYLT1P3 Gene

Variant ID Type Subtype PubMed ID
dgv4330e59 CNV duplication 20981092
esv3361414 CNV duplication 20981092
esv3429609 CNV duplication 20981092
nsv1077532 CNV duplication 25765185
nsv1110530 CNV duplication 24896259
nsv1139955 CNV duplication 24896259
nsv1152889 CNV duplication 26484159
nsv951735 CNV duplication 24416366
nsv972702 CNV duplication 23825009
nsv973596 CNV duplication 23825009

Additional Variant Information for GXYLT1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GXYLT1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GXYLT1P3 Gene

Disorders for GXYLT1P3 Gene

Additional Disease Information for GXYLT1P3

No disorders were found for GXYLT1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GXYLT1P3 Gene

Publications for GXYLT1P3 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Lineage-specific gene duplication and loss in human and great ape evolution. (PMID: 15252450) Fortna A … Sikela JM (PLoS biology 2004) 3 58

No data available for External Links for GXYLT1P3 Gene

Products for GXYLT1P3 Gene

Sources for GXYLT1P3 Gene

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