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Aliases for GUSBP9 Gene

Aliases for GUSBP9 Gene

  • GUSB Pseudogene 9 2 3
  • Glucuronidase, Beta Pseudogene 9 2 3 5

External Ids for GUSBP9 Gene

Previous GeneCards Identifiers for GUSBP9 Gene

  • GC05M070518
  • GC05M070435
  • GC05M071197

Summaries for GUSBP9 Gene

GeneCards Summary for GUSBP9 Gene

GUSBP9 (GUSB Pseudogene 9) is a Pseudogene.

Additional gene information for GUSBP9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GUSBP9 Gene

Genomics for GUSBP9 Gene

GeneHancer (GH) Regulatory Elements for GUSBP9 Gene

Promoters and enhancers for GUSBP9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J072106 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.7 -849.6 -849606 5.4 SP1 ZFX ELF3 ZNF148 MLLT1 ZNF121 MAFK TFE3 NCOA6 ZBTB7A MAP1B LOC105379028 ENSG00000285804 BDP1 TNPO1 FCHO2 ENSG00000251634 GUSBP9 RPL7P22 PTCD2
GH05J071481 Enhancer 1 Ensembl ENCODE 11.5 -223.9 -223922 2.8 ELF3 NFIB MAFK PRDM1 ZNF384 CREB1 CEBPA GATAD2A RXRB FOXA2 MCCC2 BDP1 ENSG00000253366 GUSBP9 SMN1 MRPS27 NAIP LOC100419852 HMGN1P12
GH05J071956 Enhancer 0.7 Ensembl 10.5 -697.5 -697505 2.4 PKNOX1 ZNF488 ZBTB8A ZSCAN4 ZNF662 ATF2 ZNF580 NFIC ZNF18 CREM BDP1 GUSBP9 OCLNP1 PIR47517 MAP1B
GH05J072040 Enhancer 0.3 Ensembl 11.9 -781.4 -781406 1 ZNF507 BDP1 TNPO1 GUSBP9 ENSG00000251634 MAP1B PIR47517
GH05J071287 Promoter 0.5 EPDnew 0.3 -30.5 -30455 0.1 LOC105379016 GTF2H2 GUSBP9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GUSBP9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GUSBP9 Gene

Genomic Locations for GUSBP9 Gene
chr5:71,220,226-71,259,295
(GRCh38/hg38)
Size:
39,070 bases
Orientation:
Minus strand
chr5:70,435,716-70,585,611
(GRCh37/hg19)
Size:
149,896 bases
Orientation:
Minus strand

Genomic View for GUSBP9 Gene

Genes around GUSBP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GUSBP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GUSBP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GUSBP9 Gene

Proteins for GUSBP9 Gene

Post-translational modifications for GUSBP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GUSBP9 Gene

Domains & Families for GUSBP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GUSBP9 Gene

Function for GUSBP9 Gene

Phenotypes From GWAS Catalog for GUSBP9 Gene

genes like me logo Genes that share phenotypes with GUSBP9: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GUSBP9 Gene

Localization for GUSBP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GUSBP9 Gene

Pathways & Interactions for GUSBP9 Gene

PathCards logo

SuperPathways for GUSBP9 Gene

No Data Available

Interacting Proteins for GUSBP9 Gene

Gene Ontology (GO) - Biological Process for GUSBP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GUSBP9 Gene

Drugs & Compounds for GUSBP9 Gene

No Compound Related Data Available

Transcripts for GUSBP9 Gene

mRNA/cDNA for GUSBP9 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for GUSBP9 Gene

Glucuronidase, beta pseudogene 9:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GUSBP9 Gene

No ASD Table

Relevant External Links for GUSBP9 Gene

GeneLoc Exon Structure for
GUSBP9
ECgene alternative splicing isoforms for
GUSBP9

Expression for GUSBP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GUSBP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of GUSBP9 Gene:

GUSBP9

SOURCE GeneReport for Unigene cluster for GUSBP9 Gene:

Hs.665231
genes like me logo Genes that share expression patterns with GUSBP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GUSBP9 Gene

Orthologs for GUSBP9 Gene

Evolution for GUSBP9 Gene

ENSEMBL:
Gene Tree for GUSBP9 (if available)
TreeFam:
Gene Tree for GUSBP9 (if available)

No data available for Orthologs for GUSBP9 Gene

Paralogs for GUSBP9 Gene

No data available for Paralogs for GUSBP9 Gene

Variants for GUSBP9 Gene

Sequence variations from dbSNP and Humsavar for GUSBP9 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1002100373 -- 71,250,057(-) T/A intron_variant
rs1013869597 -- 71,238,314(-) A/G intron_variant
rs1025719493 -- 71,259,227(-) G/A non_coding_transcript_variant
rs1034322630 -- 71,254,273(-) C/T intron_variant
rs1039795634 -- 71,231,066(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GUSBP9 Gene

Variant ID Type Subtype PubMed ID
dgv3315e59 CNV duplication 20981092
dgv3316e59 CNV duplication 20981092
dgv3318e59 CNV duplication 20981092
dgv3319e59 CNV duplication 20981092
dgv3320e59 CNV duplication 20981092
dgv3321e59 CNV duplication 20981092
dgv3325e59 CNV duplication 20981092
dgv5695n100 CNV gain 25217958
dgv5696n100 CNV loss 25217958
dgv5697n100 CNV gain+loss 25217958
dgv65n82 CNV duplication 23825009
dgv9838n54 CNV loss 21841781
dgv9845n54 CNV loss 21841781
esv22113 CNV gain+loss 19812545
esv2759348 CNV gain+loss 17122850
esv32787 CNV gain+loss 17666407
esv3347885 CNV duplication 20981092
esv3348902 CNV duplication 20981092
esv3362856 CNV duplication 20981092
esv3397070 CNV duplication 20981092
esv3403132 CNV duplication 20981092
esv3411587 CNV duplication 20981092
esv3434867 CNV duplication 20981092
esv3444696 CNV duplication 20981092
esv3570183 CNV loss 25503493
esv3890655 CNV gain 25118596
nsv1033366 CNV gain 25217958
nsv1034703 CNV gain 25217958
nsv10707 CNV gain+loss 18304495
nsv1076588 CNV duplication 25765185
nsv1077991 CNV duplication 25765185
nsv1078555 CNV duplication 25765185
nsv1110446 CNV duplication 24896259
nsv1115693 CNV duplication 24896259
nsv1115694 CNV duplication 24896259
nsv1115695 CNV duplication 24896259
nsv1118736 CNV duplication 24896259
nsv1122111 CNV deletion 24896259
nsv1124916 CNV duplication 24896259
nsv1124920 CNV duplication 24896259
nsv1137528 CNV deletion 24896259
nsv1150993 CNV duplication 26484159
nsv428117 CNV gain+loss 18775914
nsv433371 CNV gain 18776910
nsv433373 CNV gain 18776910
nsv471489 CNV gain 19718026
nsv508367 CNV deletion 20534489
nsv509072 CNV insertion 20534489
nsv511106 OTHER inversion 20534489
nsv511297 CNV gain 21212237
nsv598462 CNV gain 21841781
nsv598523 CNV loss 21841781
nsv598533 CNV loss 21841781
nsv598535 CNV loss 21841781
nsv598536 CNV gain 21841781
nsv598541 CNV gain 21841781
nsv598542 CNV loss 21841781
nsv598640 CNV loss 21841781
nsv7371 OTHER inversion 18451855
nsv820942 CNV deletion 20802225
nsv821643 CNV loss 15273396
nsv950087 CNV duplication 24416366
nsv964878 CNV duplication 23825009
nsv964879 CNV duplication 23825009
nsv964880 CNV duplication 23825009
nsv964882 CNV duplication 23825009
nsv964883 CNV duplication 23825009
nsv964890 CNV duplication 23825009
nsv965032 CNV duplication 23825009
nsv965033 CNV duplication 23825009
nsv965034 CNV duplication 23825009
nsv965035 CNV duplication 23825009
nsv968201 CNV duplication 23825009
nsv968203 CNV duplication 23825009
nsv968325 CNV duplication 23825009
nsv968326 CNV duplication 23825009
nsv968342 CNV duplication 23825009
nsv968932 CNV duplication 23825009
nsv968933 CNV duplication 23825009
nsv968934 CNV duplication 23825009
nsv968935 CNV duplication 23825009
nsv968936 CNV duplication 23825009
nsv968939 CNV duplication 23825009
nsv968941 CNV duplication 23825009
nsv968942 CNV duplication 23825009
nsv969084 CNV duplication 23825009
nsv980671 CNV duplication 23825009
nsv980672 CNV duplication 23825009
nsv980680 CNV duplication 23825009
nsv980810 CNV duplication 23825009
nsv980820 CNV duplication 23825009

Additional Variant Information for GUSBP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GUSBP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GUSBP9 Gene

Disorders for GUSBP9 Gene

Additional Disease Information for GUSBP9

No disorders were found for GUSBP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GUSBP9 Gene

Publications for GUSBP9 Gene

  1. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58
  4. Identification of multiple transcribed sequences from the spinal muscular atrophy region of human chromosome 5. (PMID: 7818533) Pizzuti A … Palka G (Biochemical and biophysical research communications 1995) 3 58

Products for GUSBP9 Gene

Sources for GUSBP9 Gene

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