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Aliases for GUSBP5 Gene

Aliases for GUSBP5 Gene

  • GUSB Pseudogene 5 2 3
  • Glucuronidase, Beta Pseudogene 5 2 3 5
  • GYPELOC441046 3

External Ids for GUSBP5 Gene

Previous GeneCards Identifiers for GUSBP5 Gene

  • GC04P144482

Summaries for GUSBP5 Gene

GeneCards Summary for GUSBP5 Gene

GUSBP5 (GUSB Pseudogene 5) is a Pseudogene.

Additional gene information for GUSBP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GUSBP5 Gene

Genomics for GUSBP5 Gene

GeneHancer (GH) Regulatory Elements for GUSBP5 Gene

Promoters and enhancers for GUSBP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J143558 Promoter/Enhancer 1.4 Ensembl ENCODE 625.1 -0.2 -171 1.8 CTCF CBFA2T2 NKRF ZNF687 TRIM24 SP1 CREM MLLT1 RAD21 POLR2A GUSBP5 ENSG00000251600 FREM3 ENSG00000248924
GH04J143512 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 24.9 -44.8 -44771 4.2 CC2D1A ELF3 ZFX CBFA2T2 ZNF148 NKRF POLR2A MLLT1 ZNF121 GTF2F1 SMARCA5-AS1 SMARCA5 GUSBP5
GH04J143555 Enhancer 0.5 ENCODE 25.1 -4.3 -4299 0.3 IKZF1 IKZF2 POLR2A SCRT2 RUNX3 NBN JUNB ENSG00000248924 GUSBP5 ENSG00000251600 SMARCA5-AS1 SMARCA5
GH04J142565 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 4.3 -991.8 -991816 4.5 ZNF687 MLLT1 IKZF1 IKZF2 TRIM22 RAD51 ELF1 HDGF NR2F1 NBN ENSG00000249806 LOC101927613 INPP4B GUSBP5 PIR53759
GH04J143910 Promoter/Enhancer 1.2 Ensembl ENCODE 5.7 +351.8 351828 4.2 ZFX NKRF MLLT1 ZNF687 NFIB POLR2A BACH1 LARP7 ETV6 ELF1 LOC100420464 ENSG00000249741 LOC101927636 ENSG00000250345 FREM3 GUSBP5 GYPE ENSG00000251600
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GUSBP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GUSBP5 Gene

Genomic Locations for GUSBP5 Gene
chr4:143,559,472-143,561,460
(GRCh38/hg38)
Size:
1,989 bases
Orientation:
Plus strand
chr4:144,480,625-144,570,458
(GRCh37/hg19)
Size:
89,834 bases
Orientation:
Plus strand

Genomic View for GUSBP5 Gene

Genes around GUSBP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GUSBP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GUSBP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GUSBP5 Gene

Proteins for GUSBP5 Gene

Post-translational modifications for GUSBP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GUSBP5 Gene

Domains & Families for GUSBP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GUSBP5 Gene

Function for GUSBP5 Gene

Molecular function for GUSBP5 Gene

GENATLAS Biochemistry:
beta-glucuronidase pseudogene 5,including GUSB exons 5,9,10,11

Phenotypes From GWAS Catalog for GUSBP5 Gene

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GUSBP5

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GUSBP5 Gene

Localization for GUSBP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GUSBP5 Gene

Pathways & Interactions for GUSBP5 Gene

PathCards logo

SuperPathways for GUSBP5 Gene

No Data Available

Interacting Proteins for GUSBP5 Gene

Gene Ontology (GO) - Biological Process for GUSBP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GUSBP5 Gene

Drugs & Compounds for GUSBP5 Gene

No Compound Related Data Available

Transcripts for GUSBP5 Gene

mRNA/cDNA for GUSBP5 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(9) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for GUSBP5 Gene

Glucuronidase, beta pseudogene 5:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GUSBP5

Alternative Splicing Database (ASD) splice patterns (SP) for GUSBP5 Gene

No ASD Table

Relevant External Links for GUSBP5 Gene

GeneLoc Exon Structure for
GUSBP5
ECgene alternative splicing isoforms for
GUSBP5

Expression for GUSBP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GUSBP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of GUSBP5 Gene:

GUSBP5

SOURCE GeneReport for Unigene cluster for GUSBP5 Gene:

Hs.135705
genes like me logo Genes that share expression patterns with GUSBP5: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GUSBP5 Gene

Orthologs for GUSBP5 Gene

Evolution for GUSBP5 Gene

ENSEMBL:
Gene Tree for GUSBP5 (if available)
TreeFam:
Gene Tree for GUSBP5 (if available)

No data available for Orthologs for GUSBP5 Gene

Paralogs for GUSBP5 Gene

No data available for Paralogs for GUSBP5 Gene

Variants for GUSBP5 Gene

Sequence variations from dbSNP and Humsavar for GUSBP5 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000023357 -- 143,558,568(+) C/T upstream_transcript_variant
rs1001480800 -- 143,559,266(+) GG/G upstream_transcript_variant
rs1001675834 -- 143,559,521(+) T/C non_coding_transcript_variant
rs1001746925 -- 143,559,720(+) G/A non_coding_transcript_variant
rs1001827507 -- 143,560,693(+) C/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for GUSBP5 Gene

Variant ID Type Subtype PubMed ID
esv2759288 CNV gain+loss 17122850
nsv830103 CNV loss 17160897

Additional Variant Information for GUSBP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GUSBP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GUSBP5 Gene

Disorders for GUSBP5 Gene

Additional Disease Information for GUSBP5

No disorders were found for GUSBP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GUSBP5 Gene

Publications for GUSBP5 Gene

  1. Autism genome-wide copy number variation reveals ubiquitin and neuronal genes. (PMID: 19404257) Glessner JT … Hakonarson H (Nature 2009) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for GUSBP5 Gene

Sources for GUSBP5 Gene

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