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Aliases for GUSBP2 Gene

Aliases for GUSBP2 Gene

  • GUSB Pseudogene 2 2 3
  • Glucuronidase, Beta Pseudogene 2 2 3 5
  • Spinal Muscular Atrophy Candidate Gene 3-Like 2 2 3
  • Glucuronidase, Beta-Like 1 2 3
  • Glucuronidase, Beta Pseudogene 4 3
  • BA239L20.1 3
  • BA239L20.5 3
  • B55C20.1 3
  • BGLU-Lp 3
  • SMAC3L2 3
  • GUSBP4 3
  • SMA3-L 3
  • SMAC3L 3
  • GUSBL1 3

External Ids for GUSBP2 Gene

Previous HGNC Symbols for GUSBP2 Gene

  • SMAC3L2
  • GUSBL1

Previous GeneCards Identifiers for GUSBP2 Gene

  • GC00U914129

Summaries for GUSBP2 Gene

GeneCards Summary for GUSBP2 Gene

GUSBP2 (GUSB Pseudogene 2) is a Pseudogene.

Additional gene information for GUSBP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GUSBP2 Gene

Genomics for GUSBP2 Gene

GeneHancer (GH) Regulatory Elements for GUSBP2 Gene

Promoters and enhancers for GUSBP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J026954 Promoter/Enhancer 1.5 Ensembl ENCODE 600.7 +0.7 653 4.2 CC2D1A SP1 ZFX ZNF148 NKRF MLLT1 GTF2F1 CSDE1 ZNF687 ZSCAN21 LINC00240 GUSBP2 ENSG00000261584 BTN2A2 BTN2A1 BTN3A2 ABT1 HMGN4 BTN2A3P PIR48873
GH06J026222 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 42.6 +731.1 731107 6.3 SP1 CC2D1A ELF3 ZNF121 ZNF384 ZNF687 NFRKB MAFK YY1 POLR2A HIST1H3E ABT1 GUSBP2 BTN2A2 BTN2A1 ZNF322 HMGN4 BTN2A3P HIST1H2AE ENSG00000272462
GH06J027126 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 31.9 -181.5 -181468 23 HDGF MTA3 ZNF652 SP1 ZFX CC2D1A ELF3 CTCF ZKSCAN8 CBFA2T2 HIST1H4I GC06P027588 HIST1H2BJ ZKSCAN8 ABT1 HMGN4 ZNF322 BTN2A2 BTN2A3P BTN2A1
GH06J027494 Promoter/Enhancer 1.6 Ensembl ENCODE 44.7 -539.1 -539147 2.2 ZNF473 SP1 CC2D1A ELF3 NKRF MLLT1 ZNF121 GTF2F1 CSDE1 ZNF384 TRS-AGA2-3 ZSCAN12 ZKSCAN8 ZSCAN23 ZKSCAN3 ZNF322 PGBD1 ZNF391 ZSCAN9 ZNF204P
GH06J026015 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 21.6 +930.8 930806 19.9 MTA3 SP1 ZNF652 ZFX CC2D1A ELF3 CTCF ZKSCAN8 ZNF148 NKRF HIST1H4B HIST1H3B HIST1H2AB ABT1 BTN2A2 BTN2A1 BTN2A3P HMGN4 ZNF322 ENSG00000272462
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GUSBP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GUSBP2 Gene

Genomic Locations for GUSBP2 Gene
chr6:26,871,484-26,956,554
(GRCh38/hg38)
Size:
85,071 bases
Orientation:
Minus strand
chr6:26,839,263-26,924,333
(GRCh37/hg19)
Size:
85,071 bases
Orientation:
Minus strand

Genomic View for GUSBP2 Gene

Genes around GUSBP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GUSBP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GUSBP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GUSBP2 Gene

Function for GUSBP2 Gene

Molecular function for GUSBP2 Gene

GENATLAS Biochemistry:
beta-glucuronidase pseudogene 2,including GUSB exons 5,9,10,11 (?same as ZNF5?)

Phenotypes From GWAS Catalog for GUSBP2 Gene

genes like me logo Genes that share phenotypes with GUSBP2: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials (abm): Clones for GUSBP2 - Now 50% OFF >
  • * GUSBP2 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
  • * GUSBP2 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GUSBP2 Gene

Localization for GUSBP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GUSBP2 Gene

Pathways & Interactions for GUSBP2 Gene

PathCards logo

SuperPathways for GUSBP2 Gene

No Data Available

Interacting Proteins for GUSBP2 Gene

Gene Ontology (GO) - Biological Process for GUSBP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GUSBP2 Gene

Drugs & Compounds for GUSBP2 Gene

No Compound Related Data Available

Transcripts for GUSBP2 Gene

mRNA/cDNA for GUSBP2 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for GUSBP2 Gene

Glucuronidase, beta pseudogene 2:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials (abm): Clones for GUSBP2 - Now 50% OFF >
  • * GUSBP2 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
  • * GUSBP2 tags and reporters available: His, HA, Myc, Flag, GFP, RFP, Luciferase - Browse All

Alternative Splicing Database (ASD) splice patterns (SP) for GUSBP2 Gene

No ASD Table

Relevant External Links for GUSBP2 Gene

GeneLoc Exon Structure for
GUSBP2
ECgene alternative splicing isoforms for
GUSBP2

Expression for GUSBP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GUSBP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of GUSBP2 Gene:

GUSBP2

SOURCE GeneReport for Unigene cluster for GUSBP2 Gene:

Hs.675815
genes like me logo Genes that share expression patterns with GUSBP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GUSBP2 Gene

Orthologs for GUSBP2 Gene

Evolution for GUSBP2 Gene

ENSEMBL:
Gene Tree for GUSBP2 (if available)
TreeFam:
Gene Tree for GUSBP2 (if available)

No data available for Orthologs for GUSBP2 Gene

Paralogs for GUSBP2 Gene

No data available for Paralogs for GUSBP2 Gene

Variants for GUSBP2 Gene

Sequence variations from dbSNP and Humsavar for GUSBP2 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000003754 -- 26,877,907(-) G/A intron_variant
rs1000103225 -- 26,933,964(-) T/C intron_variant
rs1000107851 -- 26,956,699(-) G/C upstream_transcript_variant
rs1000193032 -- 26,919,572(-) C/T intron_variant
rs1000203183 -- 26,919,978(-) C/G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GUSBP2 Gene

Variant ID Type Subtype PubMed ID
dgv10n29 CNV gain 16826518
dgv3466e59 CNV duplication 20981092
dgv71n82 CNV duplication 23825009
dgv72n82 CNV duplication 23825009
esv2759410 CNV gain 17122850
esv2763937 CNV gain+loss 21179565
esv28434 CNV gain+loss 19812545
esv33111 CNV loss 17666407
esv3333200 CNV duplication 20981092
esv3335635 CNV duplication 20981092
esv3390185 CNV duplication 20981092
esv3400846 CNV duplication 20981092
esv3608418 CNV gain 21293372
esv3608419 CNV loss 21293372
nsv1029124 CNV loss 25217958
nsv10806 CNV gain+loss 18304495
nsv1119075 CNV deletion 24896259
nsv1124937 CNV duplication 24896259
nsv469625 CNV gain 16826518
nsv471636 CNV gain+loss 15918152
nsv515031 CNV gain 21397061
nsv830615 CNV gain 17160897
nsv830616 CNV gain 17160897
nsv950145 CNV deletion 24416366
nsv965692 CNV duplication 23825009
nsv965693 CNV duplication 23825009
nsv965694 CNV duplication 23825009
nsv965795 CNV duplication 23825009
nsv965797 CNV duplication 23825009
nsv965799 CNV duplication 23825009
nsv969363 CNV duplication 23825009
nsv969364 CNV duplication 23825009
nsv969477 CNV duplication 23825009
nsv969478 CNV duplication 23825009
nsv970088 CNV duplication 23825009
nsv970089 CNV duplication 23825009
nsv981118 CNV duplication 23825009
nsv981214 CNV duplication 23825009

Additional Variant Information for GUSBP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GUSBP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GUSBP2 Gene

Disorders for GUSBP2 Gene

Additional Disease Information for GUSBP2

No disorders were found for GUSBP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GUSBP2 Gene

Publications for GUSBP2 Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall AJ … Beck S (Nature 2003) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. Mutational analysis of a patient with mucopolysaccharidosis type VII, and identification of pseudogenes. (PMID: 7680524) Shipley JM … Sly WS (American journal of human genetics 1993) 3 58

Products for GUSBP2 Gene

Sources for GUSBP2 Gene

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