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Aliases for GUSBP11 Gene

Aliases for GUSBP11 Gene

  • Glucuronidase, Beta Pseudogene 11 2 3 5
  • Beta-Glucuronidase Pseudogene 11 4

External Ids for GUSBP11 Gene

Previous GeneCards Identifiers for GUSBP11 Gene

  • GC22M023983

Summaries for GUSBP11 Gene

Entrez Gene Summary for GUSBP11 Gene

  • This transcribed pseudogene is similar to two functional genes. The 5' portion of the pseudogene is related to glucuronidase, beta, and the 3' portion is related to immunoglobulin lambda-like polypeptide 1. [provided by RefSeq, Jul 2011]

GeneCards Summary for GUSBP11 Gene

GUSBP11 (Glucuronidase, Beta Pseudogene 11) is a Pseudogene.

Additional gene information for GUSBP11 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GUSBP11 Gene

Genomics for GUSBP11 Gene

GeneHancer (GH) Regulatory Elements for GUSBP11 Gene

Promoters and enhancers for GUSBP11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I023716 Promoter/Enhancer 1.6 Ensembl ENCODE 550.8 +0.3 251 1.5 HDGF PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 YY1 ENSG00000272578 GUSBP11 ENSG00000273000 ZNF70 ENSG00000234353 SPECC1L VPREB3 C22orf15 RGL4 CHCHD10
GH22I023715 Enhancer 0.5 ENCODE 550.8 +1.3 1347 0.6 BCOR NR2F1 IKZF1 MLLT1 RUNX3 ENSG00000272578 ENSG00000273000 GUSBP11 ASLP1 RGL4
GH22I023772 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.3 -57.1 -57127 4.4 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ETS1 GLIS2 RXRA MMP11 VPREB3 ZNF70 SMARCB1 GUSBP11 RGL4 CHCHD10 ENSG00000273295
GH22I023518 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.8 +195.9 195857 6.4 PKNOX1 FOXA2 MLX ZFP64 ARID4B DMAP1 ZNF48 GLIS2 ATF7 SP5 LINC02557 RGL4 GUSBP11 ENSG00000227755 DDT LINC01659 ENSG00000272787 RSPH14 BCR GNAZ
GH22I023511 Enhancer 0.7 dbSUPER 10.7 +204.0 204002 4.7 CTCF BCOR ZMYM3 ZFHX2 ZNF23 POLR2A SCRT2 EGR2 SCRT1 ZNF623 LINC02557 RGL4 GUSBP11 ZDHHC8P1 ENSG00000227755 DDT LINC01659 LINC01658
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GUSBP11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GUSBP11 Gene

Genomic Locations for GUSBP11 Gene
chr22:23,638,487-23,717,423
(GRCh38/hg38)
Size:
78,937 bases
Orientation:
Minus strand
chr22:23,980,674-24,059,610
(GRCh37/hg19)

Genomic View for GUSBP11 Gene

Genes around GUSBP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GUSBP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GUSBP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GUSBP11 Gene

Proteins for GUSBP11 Gene

  • Protein details for GUSBP11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6P575-BGP11_HUMAN
    Recommended name:
    Putative inactive beta-glucuronidase protein GUSBP11
    Protein Accession:
    Q6P575

    Protein attributes for GUSBP11 Gene

    Size:
    273 amino acids
    Molecular mass:
    29908 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GUSBP11 Gene

Post-translational modifications for GUSBP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GUSBP11 Gene

Domains & Families for GUSBP11 Gene

Protein Domains for GUSBP11 Gene

Graphical View of Domain Structure for InterPro Entry

Q6P575

UniProtKB/Swiss-Prot:

BGP11_HUMAN :
  • Belongs to the glycosyl hydrolase 2 family.
Family:
  • Belongs to the glycosyl hydrolase 2 family.
genes like me logo Genes that share domains with GUSBP11: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for GUSBP11 Gene

Function for GUSBP11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GUSBP11 Gene

Localization for GUSBP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GUSBP11 Gene

Pathways & Interactions for GUSBP11 Gene

SuperPathways for GUSBP11 Gene

No Data Available

Interacting Proteins for GUSBP11 Gene

Gene Ontology (GO) - Biological Process for GUSBP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GUSBP11 Gene

Drugs & Compounds for GUSBP11 Gene

No Compound Related Data Available

Transcripts for GUSBP11 Gene

Unigene Clusters for GUSBP11 Gene

Glucuronidase, beta pseudogene 11:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GUSBP11 Gene

No ASD Table

Relevant External Links for GUSBP11 Gene

GeneLoc Exon Structure for
GUSBP11
ECgene alternative splicing isoforms for
GUSBP11

Expression for GUSBP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GUSBP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of GUSBP11 Gene:

GUSBP11

SOURCE GeneReport for Unigene cluster for GUSBP11 Gene:

Hs.148656
genes like me logo Genes that share expression patterns with GUSBP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GUSBP11 Gene

Orthologs for GUSBP11 Gene

Evolution for GUSBP11 Gene

ENSEMBL:
Gene Tree for GUSBP11 (if available)
TreeFam:
Gene Tree for GUSBP11 (if available)

No data available for Orthologs for GUSBP11 Gene

Paralogs for GUSBP11 Gene

No data available for Paralogs for GUSBP11 Gene

Variants for GUSBP11 Gene

Sequence variations from dbSNP and Humsavar for GUSBP11 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000071043 -- 23,684,700(-) T/C intron_variant
rs1000137322 -- 23,667,882(-) T/C intron_variant
rs1000166937 -- 23,716,221(-) G/A intron_variant
rs1000220298 -- 23,679,872(-) G/A intron_variant
rs1000363432 -- 23,661,296(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GUSBP11 Gene

Variant ID Type Subtype PubMed ID
dgv2606e59 CNV duplication 20981092
dgv4528n100 CNV gain 25217958
dgv4529n100 CNV gain 25217958
dgv750n67 CNV loss 20364138
dgv8039n54 CNV gain 21841781
dgv8043n54 CNV gain 21841781
dgv8044n54 CNV loss 21841781
dgv8045n54 CNV loss 21841781
dgv8046n54 CNV loss 21841781
dgv8047n54 CNV loss 21841781
dgv8048n54 CNV loss 21841781
dgv8049n54 CNV loss 21841781
esv1003785 CNV deletion 20482838
esv1005421 CNV deletion 20482838
esv23191 CNV loss 19812545
esv2661922 CNV deletion 23128226
esv2724041 CNV deletion 23290073
esv2724056 CNV deletion 23290073
esv2724060 CNV deletion 23290073
esv2724061 CNV deletion 23290073
esv2724063 CNV deletion 23290073
esv2751941 CNV gain 17911159
esv2762117 CNV gain 21179565
esv29866 CNV gain 19812545
esv3037123 CNV deletion 24192839
esv3234345 CNV deletion 24192839
esv3369100 CNV duplication 20981092
esv3376176 CNV duplication 20981092
esv3386961 CNV duplication 20981092
esv3405455 CNV insertion 20981092
esv3557980 CNV deletion 23714750
esv3575443 CNV gain 25503493
esv3647411 CNV loss 21293372
esv3647412 CNV loss 21293372
esv3647414 CNV loss 21293372
esv3893457 CNV gain 25118596
esv3893461 CNV gain 25118596
nsv1062411 CNV gain 25217958
nsv1064874 CNV gain 25217958
nsv1066891 CNV gain 25217958
nsv1110863 OTHER inversion 24896259
nsv1123581 CNV deletion 24896259
nsv1123582 CNV deletion 24896259
nsv1147341 CNV deletion 26484159
nsv3575 CNV insertion 18451855
nsv436353 CNV deletion 17901297
nsv459682 CNV gain 19166990
nsv471187 CNV gain 18288195
nsv511649 CNV loss 21212237
nsv512648 CNV loss 21212237
nsv520582 CNV gain 19592680
nsv526278 CNV loss 19592680
nsv526567 CNV gain 19592680
nsv588623 CNV loss 21841781
nsv588624 CNV loss 21841781
nsv7350 OTHER inversion 18451855
nsv819573 CNV gain 19587683
nsv821562 CNV deletion 20802225
nsv955505 CNV deletion 24416366
nsv962770 CNV duplication 23825009
nsv964606 CNV duplication 23825009

Additional Variant Information for GUSBP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GUSBP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GUSBP11 Gene

Disorders for GUSBP11 Gene

Additional Disease Information for GUSBP11

No disorders were found for GUSBP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GUSBP11 Gene

Publications for GUSBP11 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  3. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I … O'Brien KP (Nature 1999) 4 58
  4. Composite exon structure of an unusual Ig lambda-like gene located at human 22q11 position. (PMID: 8678981) Schiff C … Fougereau M (Mammalian genome : official journal of the International Mammalian Genome Society 1996) 3 58
  5. Isolation of early immunoglobulin lambda-like gene transcripts in human fetal liver. (PMID: 2511029) Schiff C … Fougereau M (European journal of immunology 1989) 3 58

Products for GUSBP11 Gene

Sources for GUSBP11 Gene

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