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Aliases for GTF3AP5 Gene

Aliases for GTF3AP5 Gene

  • General Transcription Factor IIIA Pseudogene 5 2 3 5

External Ids for GTF3AP5 Gene

Previous GeneCards Identifiers for GTF3AP5 Gene

  • GC07M015024

Summaries for GTF3AP5 Gene

GeneCards Summary for GTF3AP5 Gene

GTF3AP5 (General Transcription Factor IIIA Pseudogene 5) is a Pseudogene.

Additional gene information for GTF3AP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GTF3AP5 Gene

Genomics for GTF3AP5 Gene

GeneHancer (GH) Regulatory Elements for GTF3AP5 Gene

Promoters and enhancers for GTF3AP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J015015 Enhancer 0.7 ENCODE 0.3 -29.9 -29945 1.5 CTCF RAD21 RXRA TRIM22 FOXA2 RFX1 JUND SMC3 RCOR1 ELF1 GC07M015018 GTF3AP5
GH07J015007 Enhancer 0.5 Ensembl 0.3 -21.8 -21775 0.2 SP1 RXRA CTCF JUND RAD21 HNF4A ZNF143 GC07M015018 GTF3AP5
GH07J015011 Enhancer 0.5 Ensembl ENCODE 0.3 -25.6 -25576 1 BACH1 GC07M015018 GTF3AP5
GH07J015016 Enhancer 0.3 ENCODE 0.3 -30.8 -30816 0.2 JUND GC07M015018 GTF3AP5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GTF3AP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GTF3AP5 Gene

Genomic Locations for GTF3AP5 Gene
chr7:14,985,298-14,986,125
(GRCh38/hg38)
Size:
828 bases
Orientation:
Minus strand
chr7:15,024,923-15,025,750
(GRCh37/hg19)
Size:
828 bases
Orientation:
Minus strand

Genomic View for GTF3AP5 Gene

Genes around GTF3AP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF3AP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF3AP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF3AP5 Gene

Proteins for GTF3AP5 Gene

Post-translational modifications for GTF3AP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF3AP5 Gene

Domains & Families for GTF3AP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GTF3AP5 Gene

Function for GTF3AP5 Gene

Phenotypes From GWAS Catalog for GTF3AP5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF3AP5 Gene

Localization for GTF3AP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF3AP5 Gene

Pathways & Interactions for GTF3AP5 Gene

PathCards logo

SuperPathways for GTF3AP5 Gene

No Data Available

Interacting Proteins for GTF3AP5 Gene

Gene Ontology (GO) - Biological Process for GTF3AP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GTF3AP5 Gene

Drugs & Compounds for GTF3AP5 Gene

No Compound Related Data Available

Transcripts for GTF3AP5 Gene

mRNA/cDNA for GTF3AP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GTF3AP5 Gene

No ASD Table

Relevant External Links for GTF3AP5 Gene

GeneLoc Exon Structure for
GTF3AP5
ECgene alternative splicing isoforms for
GTF3AP5

Expression for GTF3AP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of GTF3AP5 Gene:

GTF3AP5
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF3AP5 Gene

Orthologs for GTF3AP5 Gene

Evolution for GTF3AP5 Gene

ENSEMBL:
Gene Tree for GTF3AP5 (if available)
TreeFam:
Gene Tree for GTF3AP5 (if available)

No data available for Orthologs for GTF3AP5 Gene

Paralogs for GTF3AP5 Gene

No data available for Paralogs for GTF3AP5 Gene

Variants for GTF3AP5 Gene

Additional Variant Information for GTF3AP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF3AP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF3AP5 Gene

Disorders for GTF3AP5 Gene

No disorders were found for GTF3AP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GTF3AP5 Gene

Publications for GTF3AP5 Gene

No publications were found for GTF3AP5 Gene.

Products for GTF3AP5 Gene

Sources for GTF3AP5 Gene

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