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Aliases for GTF2IP9 Gene

Aliases for GTF2IP9 Gene

  • General Transcription Factor IIi Pseudogene 9 2 3 5

External Ids for GTF2IP9 Gene

Summaries for GTF2IP9 Gene

GeneCards Summary for GTF2IP9 Gene

GTF2IP9 (General Transcription Factor IIi Pseudogene 9) is a Pseudogene.

Additional gene information for GTF2IP9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GTF2IP9 Gene

Genomics for GTF2IP9 Gene

GeneHancer (GH) Regulatory Elements for GTF2IP9 Gene

Promoters and enhancers for GTF2IP9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I065749 Promoter/Enhancer 1.5 Ensembl ENCODE 19.2 +658.1 658130 2.8 HDGF PKNOX1 SMAD1 ARNT ARID4B NEUROD1 SIN3A DMAP1 ZNF2 YY1 CCT6P1 VKORC1L1 ENSG00000244657 LOC100996437 ENSG00000230189 LINC00174 ENSG00000229180 LOC84214 LOC100420547 GTF2IP9
GH07I066993 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.7 -586.5 -586539 4.4 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 TYW1 SBDS ENSG00000229180 LOC100420547 ENSG00000244657 SPDYE21P TMEM248 RABGEF1 ENSG00000230189 STAG3L4
GH07I066113 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.7 +294.1 294134 2.5 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 CRCP LOC100996437 VKORC1L1 GS1-124K5.4 LOC100420547 ENSG00000229180 TMEM248 CCT6P1 ENSG00000244657 GUSB
GH07I066098 Enhancer 1.2 Ensembl ENCODE 9.7 +309.3 309342 2.6 HDGF PKNOX1 CLOCK ARNT SIN3A ZNF2 ZBTB7B POLR2B E2F8 ZNF143 LOC100996437 LOC100420547 VKORC1L1 ENSG00000229180 TMEM248 CCT6P1 GUSB GS1-124K5.4 TYW1 RABGEF1
GH07I066413 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.8 -4.5 -4468 1.4 PKNOX1 NFIB SIN3A ZNF2 RAD21 RFX5 YY1 ZNF335 GLIS2 SCRT2 LOC100996437 RABGEF1 CCT6P1 KCTD7 GTF2IP9 SKP1P1 LINC00174 TPST1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GTF2IP9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GTF2IP9 Gene

Genomic Locations for GTF2IP9 Gene
chr7:66,407,288-66,409,239
(GRCh38/hg38)
Size:
1,952 bases
Orientation:
Minus strand
chr7:65,872,275-65,874,226
(GRCh37/hg19)

Genomic View for GTF2IP9 Gene

Genes around GTF2IP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF2IP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF2IP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF2IP9 Gene

Proteins for GTF2IP9 Gene

Post-translational modifications for GTF2IP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF2IP9 Gene

Domains & Families for GTF2IP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GTF2IP9 Gene

Function for GTF2IP9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF2IP9 Gene

Localization for GTF2IP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF2IP9 Gene

Pathways & Interactions for GTF2IP9 Gene

SuperPathways for GTF2IP9 Gene

No Data Available

Interacting Proteins for GTF2IP9 Gene

Gene Ontology (GO) - Biological Process for GTF2IP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GTF2IP9 Gene

Drugs & Compounds for GTF2IP9 Gene

No Compound Related Data Available

Transcripts for GTF2IP9 Gene

mRNA/cDNA for GTF2IP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GTF2IP9 Gene

No ASD Table

Relevant External Links for GTF2IP9 Gene

GeneLoc Exon Structure for
GTF2IP9
ECgene alternative splicing isoforms for
GTF2IP9

Expression for GTF2IP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of GTF2IP9 Gene:

GTF2IP9
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF2IP9 Gene

Orthologs for GTF2IP9 Gene

Evolution for GTF2IP9 Gene

ENSEMBL:
Gene Tree for GTF2IP9 (if available)
TreeFam:
Gene Tree for GTF2IP9 (if available)

No data available for Orthologs for GTF2IP9 Gene

Paralogs for GTF2IP9 Gene

No data available for Paralogs for GTF2IP9 Gene

Variants for GTF2IP9 Gene

Additional Variant Information for GTF2IP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF2IP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF2IP9 Gene

Disorders for GTF2IP9 Gene

No disorders were found for GTF2IP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GTF2IP9 Gene

Publications for GTF2IP9 Gene

No publications were found for GTF2IP9 Gene.

Products for GTF2IP9 Gene

Sources for GTF2IP9 Gene

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