Aliases for GTF2IP7 Gene

Aliases for GTF2IP7 Gene

  • General Transcription Factor IIi Pseudogene 7 2 3 5

External Ids for GTF2IP7 Gene

Previous GeneCards Identifiers for GTF2IP7 Gene

  • GC07M076092
  • GC07M076160
  • GC07M076166
  • GC07M076098
  • GC07M076110
  • GC07M076120
  • GC07M076127
  • GC07M076134
  • GC07M076141
  • GC07M076148
  • GC07M076150

Summaries for GTF2IP7 Gene

GeneCards Summary for GTF2IP7 Gene

GTF2IP7 (General Transcription Factor IIi Pseudogene 7) is a Pseudogene.

Additional gene information for GTF2IP7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GTF2IP7 Gene

Genomics for GTF2IP7 Gene

GeneHancer (GH) Regulatory Elements for GTF2IP7 Gene

Promoters and enhancers for GTF2IP7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J076162 Promoter/Enhancer 1.6 FANTOM5 ENCODE CraniofacialAtlas 750.6 -0.7 -650 4.7 SP1 ZBTB40 CTCF ZBTB6 RBPJ POLR2A ATF1 CREB1 MYC CC2D1A GTF2IP7 SRRM3 lnc-SRRM3-4 lnc-SRRM3-5 piR-45357-002 STYXL1 ENSG00000205485 STAG3L1 SPDYE18 PMS2P3
GH07J076101 Enhancer 0.5 Ensembl 5.2 +62.3 62287 1.4 ZNF652 ZNF316 NFE2 JUN EMSY SMARCA5 STYXL1 ENSG00000230882 MDH2 SRRM3 CCL26 CCL24 GTF2IP7 lnc-MDH2-2 lnc-STYXL1-4 lnc-STYXL1-1
GH07J076198 Enhancer 0.4 Ensembl ENCODE 5.3 -34.4 -34377 1.3 POLR2A piR-50444-436 GTF2IP7 lnc-YWHAG-1 SRRM3 lnc-STYXL1-1
GH07J076153 Enhancer 0.8 Ensembl ENCODE 0.4 +11.6 11587 3.6 SMARCE1 DACH1 MLLT1 CBFA2T2 SMARCA4 IKZF1 ATF1 PKNOX1 HDAC1 SOX6 STYXL1 ENSG00000230882 MDH2 PMS2P2 LOC100996476 GTF2IP7 piR-45357-002 lnc-STYXL1-1
GH07J076104 Promoter/Enhancer 1.4 Ensembl ENCODE 0.2 +56.9 56876 5.1 SREBF1 FOXA1 MLX RBPJ SMARCE1 CREB1 MIXL1 MNT ZNF652 ZBTB33 lnc-STYXL1-4 STYXL1 MDH2 ENSG00000230882 SRRM3 CCL26 RHBDD2 lnc-MDH2-2 ENSG00000224273 GTF2IP7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GTF2IP7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GTF2IP7 Gene

Genomic Locations for GTF2IP7 Gene
chr7:76,077,255-76,164,388
(GRCh38/hg38)
Size:
87,134 bases
Orientation:
Minus strand
chr7:75,719,749-75,738,097
(GRCh37/hg19)
Size:
18,349 bases
Orientation:
Minus strand

Genomic View for GTF2IP7 Gene

Genes around GTF2IP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF2IP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF2IP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF2IP7 Gene

Proteins for GTF2IP7 Gene

Post-translational modifications for GTF2IP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF2IP7 Gene

Domains & Families for GTF2IP7 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GTF2IP7 Gene

Function for GTF2IP7 Gene

Phenotypes From GWAS Catalog for GTF2IP7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF2IP7 Gene

Localization for GTF2IP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF2IP7 Gene

Pathways & Interactions for GTF2IP7 Gene

PathCards logo

SuperPathways for GTF2IP7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GTF2IP7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GTF2IP7 Gene

Drugs & Compounds for GTF2IP7 Gene

No Compound Related Data Available

Transcripts for GTF2IP7 Gene

mRNA/cDNA for GTF2IP7 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GTF2IP7 Gene

No ASD Table

Relevant External Links for GTF2IP7 Gene

GeneLoc Exon Structure for
GTF2IP7
ECgene alternative splicing isoforms for
GTF2IP7

Expression for GTF2IP7 Gene

NURSA nuclear receptor signaling pathways regulating expression of GTF2IP7 Gene:

GTF2IP7
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF2IP7 Gene

Orthologs for GTF2IP7 Gene

Evolution for GTF2IP7 Gene

ENSEMBL:
Gene Tree for GTF2IP7 (if available)
TreeFam:
Gene Tree for GTF2IP7 (if available)

No data available for Orthologs for GTF2IP7 Gene

Paralogs for GTF2IP7 Gene

No data available for Paralogs for GTF2IP7 Gene

Variants for GTF2IP7 Gene

Sequence variations from dbSNP and Humsavar for GTF2IP7 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1002610434 -- 76,107,467(-) A/G intron_variant
rs1005890804 -- 76,107,437(-) C/G intron_variant
rs1006419660 -- 76,105,741(-) C/T intron_variant
rs10085567 -- 76,104,888(-) A/C intron_variant
rs1013102487 -- 76,107,807(-) G/C intron_variant

Additional Variant Information for GTF2IP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF2IP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF2IP7 Gene

Disorders for GTF2IP7 Gene

Additional Disease Information for GTF2IP7

No disorders were found for GTF2IP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GTF2IP7 Gene

Publications for GTF2IP7 Gene

No publications were found for GTF2IP7 Gene.

No data available for External Links for GTF2IP7 Gene

Products for GTF2IP7 Gene

Sources for GTF2IP7 Gene