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Aliases for GTF2IP7 Gene

Aliases for GTF2IP7 Gene

  • General Transcription Factor IIi Pseudogene 7 2 3 5

External Ids for GTF2IP7 Gene

Previous GeneCards Identifiers for GTF2IP7 Gene

  • GC07M076092
  • GC07M076160
  • GC07M076098
  • GC07M076110
  • GC07M076120
  • GC07M076127
  • GC07M076134
  • GC07M076141
  • GC07M076148
  • GC07M076150

Summaries for GTF2IP7 Gene

GeneCards Summary for GTF2IP7 Gene

GTF2IP7 (General Transcription Factor IIi Pseudogene 7) is a Pseudogene.

Additional gene information for GTF2IP7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GTF2IP7 Gene

Genomics for GTF2IP7 Gene

GeneHancer (GH) Regulatory Elements for GTF2IP7 Gene

Promoters and enhancers for GTF2IP7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J076162 Enhancer 1.4 FANTOM5 ENCODE 600.7 -0.7 -650 4.7 MTA3 SP1 ZFX CC2D1A MNT POLR2A MLLT1 GTF2F1 CSDE1 BACH1 GTF2IP7 SRRM3 STYXL1 ENSG00000230882 MDH2 UPK3B POR RHBDD2
GH07J076225 Enhancer 1 Ensembl ENCODE 5.6 -61.4 -61413 5.6 ZNF652 ELF3 AHR TFE3 GATAD2A REST RXRB IRF2 KMT2B SOX13 PMS2P3 STAG3L1 STYXL1 NSUN5P1 SRRM3 ENSG00000230882 SPDYE18 SPDYE5 FAM185BP GTF2IP7
GH07J076198 Enhancer 0.3 ENCODE 5.3 -34.2 -34210 0.9 POLR2A GTF2IP7 GC07P076189 SRRM3 GC07P076244
GH07J076104 Promoter/Enhancer 1.7 Ensembl ENCODE 0.2 +56.9 56876 5.1 ZNF652 ELF3 CEBPG AHR ZNF24 MAFK SP1 SP5 SMARCA4 KAT8 STYXL1 MDH2 ENSG00000230882 SRRM3 CCL26 RHBDD2 ENSG00000213549 RNU6-863P ENSG00000224273 GTF2IP7
GH07J076153 Enhancer 0.7 ENCODE 0.4 +10.7 10650 0.2 CBFA2T2 MLLT1 SMARCA4 IKZF1 ATF1 PKNOX1 HDAC1 SOX6 TCF12 CTBP1 LOC100996476 GTF2IP7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GTF2IP7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GTF2IP7 Gene

Genomic Locations for GTF2IP7 Gene
chr7:76,077,255-76,164,388
(GRCh38/hg38)
Size:
87,134 bases
Orientation:
Minus strand
chr7:75,719,749-75,738,097
(GRCh37/hg19)
Size:
18,349 bases
Orientation:
Minus strand

Genomic View for GTF2IP7 Gene

Genes around GTF2IP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF2IP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF2IP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF2IP7 Gene

Proteins for GTF2IP7 Gene

Post-translational modifications for GTF2IP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF2IP7 Gene

Domains & Families for GTF2IP7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GTF2IP7 Gene

Function for GTF2IP7 Gene

Phenotypes From GWAS Catalog for GTF2IP7 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF2IP7 Gene

Localization for GTF2IP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF2IP7 Gene

Pathways & Interactions for GTF2IP7 Gene

PathCards logo

SuperPathways for GTF2IP7 Gene

No Data Available

Interacting Proteins for GTF2IP7 Gene

Gene Ontology (GO) - Biological Process for GTF2IP7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GTF2IP7 Gene

Drugs & Compounds for GTF2IP7 Gene

No Compound Related Data Available

Transcripts for GTF2IP7 Gene

mRNA/cDNA for GTF2IP7 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GTF2IP7 Gene

No ASD Table

Relevant External Links for GTF2IP7 Gene

GeneLoc Exon Structure for
GTF2IP7
ECgene alternative splicing isoforms for
GTF2IP7

Expression for GTF2IP7 Gene

NURSA nuclear receptor signaling pathways regulating expression of GTF2IP7 Gene:

GTF2IP7
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF2IP7 Gene

Orthologs for GTF2IP7 Gene

Evolution for GTF2IP7 Gene

ENSEMBL:
Gene Tree for GTF2IP7 (if available)
TreeFam:
Gene Tree for GTF2IP7 (if available)

No data available for Orthologs for GTF2IP7 Gene

Paralogs for GTF2IP7 Gene

No data available for Paralogs for GTF2IP7 Gene

Variants for GTF2IP7 Gene

Sequence variations from dbSNP and Humsavar for GTF2IP7 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1002610434 -- 76,107,467(-) A/G intron_variant
rs1005890804 -- 76,107,437(-) C/G intron_variant
rs1006419660 -- 76,105,741(-) C/T intron_variant
rs10085567 -- 76,104,888(-) A/C intron_variant
rs1013102487 -- 76,107,807(-) G/C intron_variant

Additional Variant Information for GTF2IP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF2IP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF2IP7 Gene

Disorders for GTF2IP7 Gene

Additional Disease Information for GTF2IP7

No disorders were found for GTF2IP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GTF2IP7 Gene

Publications for GTF2IP7 Gene

No publications were found for GTF2IP7 Gene.

No data available for External Links for GTF2IP7 Gene

Products for GTF2IP7 Gene

Sources for GTF2IP7 Gene

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