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Aliases for GTF2IP5 Gene

Aliases for GTF2IP5 Gene

  • General Transcription Factor IIi Pseudogene 5 2 3 5

External Ids for GTF2IP5 Gene

Summaries for GTF2IP5 Gene

GeneCards Summary for GTF2IP5 Gene

GTF2IP5 (General Transcription Factor IIi Pseudogene 5) is a Pseudogene.

Additional gene information for GTF2IP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GTF2IP5 Gene

Genomics for GTF2IP5 Gene

GeneHancer (GH) Regulatory Elements for GTF2IP5 Gene

Promoters and enhancers for GTF2IP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J065800 Enhancer 0.9 Ensembl ENCODE 5.3 +27.9 27893 1.8 CBFA2T2 CEBPG TRIM24 IKZF1 ATF1 HDAC1 SOX6 CTBP1 HDAC2 NCOR1 VKORC1L1 GTF2IP5 RABGEF1 PIR42877 GC07P065775 GC07M065776
GH07J065622 Enhancer 0.5 Ensembl 3.8 -148.7 -148719 5 RNF2 PRDM10 CTCF OSR2 VKORC1L1 ENSG00000236529 ENSG00000237310 ZNF117 GTF2IP5 LOC402279 GC07P065605 INTS4P2
GH07J065797 Enhancer 0.9 Ensembl ENCODE 0.3 +25.0 24968 1.7 SP1 ZNF687 JUND CREM IKZF1 BACH1 IKZF2 POLR2A PKNOX1 DPF2 PIR42877 GTF2IP5 GC07P065775 GC07M065776
GH07J065794 Enhancer 0.8 Ensembl ENCODE 0.3 +21.4 21379 0.8 ELF3 RXRB FOXA2 SAP130 TEAD1 SMAD4 RARA NR2F6 TEAD3 SOX5 PIR42877 GTF2IP5 GC07P065775 GC07M065776
GH07J065778 Enhancer 0.2 Ensembl 0.4 +5.3 5281 0.2 GC07P065775 GTF2IP5 PIR42877 GC07M065776
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GTF2IP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GTF2IP5 Gene

Genomic Locations for GTF2IP5 Gene
chr7:65,773,620-65,802,092
(GRCh38/hg38)
Size:
28,473 bases
Orientation:
Plus strand
chr7:65,238,607-65,267,079
(GRCh37/hg19)
Size:
28,473 bases
Orientation:
Plus strand

Genomic View for GTF2IP5 Gene

Genes around GTF2IP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF2IP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF2IP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF2IP5 Gene

Proteins for GTF2IP5 Gene

Post-translational modifications for GTF2IP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF2IP5 Gene

Domains & Families for GTF2IP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GTF2IP5 Gene

Function for GTF2IP5 Gene

Phenotypes From GWAS Catalog for GTF2IP5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF2IP5 Gene

Localization for GTF2IP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF2IP5 Gene

Pathways & Interactions for GTF2IP5 Gene

PathCards logo

SuperPathways for GTF2IP5 Gene

No Data Available

Interacting Proteins for GTF2IP5 Gene

Gene Ontology (GO) - Biological Process for GTF2IP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GTF2IP5 Gene

Drugs & Compounds for GTF2IP5 Gene

No Compound Related Data Available

Transcripts for GTF2IP5 Gene

mRNA/cDNA for GTF2IP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GTF2IP5 Gene

No ASD Table

Relevant External Links for GTF2IP5 Gene

GeneLoc Exon Structure for
GTF2IP5
ECgene alternative splicing isoforms for
GTF2IP5

Expression for GTF2IP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of GTF2IP5 Gene:

GTF2IP5
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF2IP5 Gene

Orthologs for GTF2IP5 Gene

Evolution for GTF2IP5 Gene

ENSEMBL:
Gene Tree for GTF2IP5 (if available)
TreeFam:
Gene Tree for GTF2IP5 (if available)

No data available for Orthologs for GTF2IP5 Gene

Paralogs for GTF2IP5 Gene

No data available for Paralogs for GTF2IP5 Gene

Variants for GTF2IP5 Gene

Additional Variant Information for GTF2IP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF2IP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF2IP5 Gene

Disorders for GTF2IP5 Gene

No disorders were found for GTF2IP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GTF2IP5 Gene

Publications for GTF2IP5 Gene

No publications were found for GTF2IP5 Gene.

No data available for External Links for GTF2IP5 Gene

Products for GTF2IP5 Gene

Sources for GTF2IP5 Gene

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