Aliases for GTF2IP20 Gene

Aliases for GTF2IP20 Gene

  • General Transcription Factor IIi Pseudogene 20 2 3 5
  • GTF2IP20 5

External Ids for GTF2IP20 Gene

Previous GeneCards Identifiers for GTF2IP20 Gene

  • GC01M223985
  • GC01M223953
  • GC01M223954
  • GC01M223995
  • GC01M224037

Summaries for GTF2IP20 Gene

GeneCards Summary for GTF2IP20 Gene

GTF2IP20 (General Transcription Factor IIi Pseudogene 20) is a Pseudogene.

Additional gene information for GTF2IP20 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GTF2IP20 Gene

Genomics for GTF2IP20 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GTF2IP20 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GTF2IP20 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GTF2IP20 Gene

Latest Assembly
chr1:223,951,266-223,992,644
(GRCh38/hg38)
Size:
41,379 bases
Orientation:
Minus strand

Previous Assembly
chr1:224,138,968-224,180,346
(GRCh37/hg19 by Entrez Gene)
Size:
41,379 bases
Orientation:
Minus strand

chr1:224,139,096-224,141,141
(GRCh37/hg19 by Ensembl)
Size:
2,046 bases
Orientation:
Minus strand

Genomic View for GTF2IP20 Gene

Genes around GTF2IP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF2IP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF2IP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF2IP20 Gene

Proteins for GTF2IP20 Gene

Post-translational modifications for GTF2IP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF2IP20 Gene

Domains & Families for GTF2IP20 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GTF2IP20 Gene

Function for GTF2IP20 Gene

Phenotypes From GWAS Catalog for GTF2IP20 Gene

Phenotypes for GTF2IP20 Gene

genes like me logo Genes that share phenotypes with GTF2IP20: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF2IP20 Gene

Localization for GTF2IP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF2IP20 Gene

Pathways & Interactions for GTF2IP20 Gene

PathCards logo

SuperPathways for GTF2IP20 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GTF2IP20 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GTF2IP20 Gene

Drugs & Compounds for GTF2IP20 Gene

No Compound Related Data Available

Transcripts for GTF2IP20 Gene

mRNA/cDNA for GTF2IP20 Gene

12 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GTF2IP20 Gene

No ASD Table

Relevant External Links for GTF2IP20 Gene

GeneLoc Exon Structure for
GTF2IP20

Expression for GTF2IP20 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for GTF2IP20

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF2IP20 Gene

Orthologs for GTF2IP20 Gene

Evolution for GTF2IP20 Gene

ENSEMBL:
Gene Tree for GTF2IP20 (if available)
TreeFam:
Gene Tree for GTF2IP20 (if available)

No data available for Orthologs for GTF2IP20 Gene

Paralogs for GTF2IP20 Gene

No data available for Paralogs for GTF2IP20 Gene

Variants for GTF2IP20 Gene

Additional Variant Information for GTF2IP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF2IP20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF2IP20 Gene

Disorders for GTF2IP20 Gene

Additional Disease Information for GTF2IP20

No disorders were found for GTF2IP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GTF2IP20 Gene

Publications for GTF2IP20 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang AG … Kim NS (Biochemical and biophysical research communications 2006) 3
  3. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3

Products for GTF2IP20 Gene

Sources for GTF2IP20 Gene