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Aliases for GTF2F2P2 Gene

Subcategory (RNA class) for GTF2F2P2 Gene

lncRNA

Aliases for GTF2F2P2 Gene

  • General Transcription Factor IIF Subunit 2 Pseudogene 2 2 3 5
  • General Transcription Factor IIF, Polypeptide 2 Pseudogene 2 2 3
  • General Transcription Factor IIF, Polypeptide 2, 30kDa Pseudogene 3

External Ids for GTF2F2P2 Gene

ORGUL Members for GTF2F2P2 Gene

Previous GeneCards Identifiers for GTF2F2P2 Gene

  • GC01M041061

Summaries for GTF2F2P2 Gene

GeneCards Summary for GTF2F2P2 Gene

GTF2F2P2 (General Transcription Factor IIF Subunit 2 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GTF2F2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GTF2F2P2 Gene

Genomics for GTF2F2P2 Gene

GeneHancer (GH) Regulatory Elements for GTF2F2P2 Gene

Promoters and enhancers for GTF2F2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J040592 Promoter 0.9 Ensembl 600.7 +1.9 1852 0.2 CC2D1A CTCF REST RFX1 ZSCAN5C RUNX3 PKNOX1 RAD21 SMC3 ZNF614 GTF2F2P2 ENSG00000238287 EXO5 ZNF684 NFYC MIR30C1 MIR30E GC01P040586
GH01J040612 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -18.2 -18243 0.8 CC2D1A ELF3 CTCF PRDM1 RAD21 ARID2 RELA ZIC2 GATAD2A ZNF143 NFYC MIR30C1 MIR30E GC01M040627 GTF2F2P2
GH01J040620 Enhancer 0.7 Ensembl dbSUPER 0.3 -31.4 -31419 1.3 CTCF PKNOX1 FOSL1 RAD21 SMC3 FOS GC01M040627 ENSG00000237899 GTF2F2P2 RIMS3
GH01J040605 Enhancer 0.5 Ensembl 0.4 -13.0 -13048 3.2 MCM2 CEBPG CEBPB ZBTB5 ENSG00000238287 EXO5 NFYC MIR30E MIR30C1 ZFP69 SLFNL1 ENSG00000237899 GTF2F2P2 GC01M040627
GH01J040590 Enhancer 0.2 Ensembl 0.7 +3.6 3553 0.4 ZNF684 EXO5 ENSG00000238287 NFYC MIR30E MIR30C1 GTF2F2P2 GC01P040586
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GTF2F2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GTF2F2P2 Gene

Genomic Locations for GTF2F2P2 Gene
chr1:40,593,633-40,594,353
(GRCh38/hg38)
Size:
721 bases
Orientation:
Minus strand
chr1:41,059,305-41,060,025
(GRCh37/hg19)
Size:
721 bases
Orientation:
Minus strand

Genomic View for GTF2F2P2 Gene

Genes around GTF2F2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF2F2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF2F2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF2F2P2 Gene

Proteins for GTF2F2P2 Gene

Post-translational modifications for GTF2F2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF2F2P2 Gene

Domains & Families for GTF2F2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GTF2F2P2 Gene

Function for GTF2F2P2 Gene

Phenotypes From GWAS Catalog for GTF2F2P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF2F2P2 Gene

Localization for GTF2F2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF2F2P2 Gene

Pathways & Interactions for GTF2F2P2 Gene

PathCards logo

SuperPathways for GTF2F2P2 Gene

No Data Available

Interacting Proteins for GTF2F2P2 Gene

Gene Ontology (GO) - Biological Process for GTF2F2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GTF2F2P2 Gene

Drugs & Compounds for GTF2F2P2 Gene

No Compound Related Data Available

Transcripts for GTF2F2P2 Gene

mRNA/cDNA for GTF2F2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GTF2F2P2 Gene

No ASD Table

Relevant External Links for GTF2F2P2 Gene

GeneLoc Exon Structure for
GTF2F2P2
ECgene alternative splicing isoforms for
GTF2F2P2

Expression for GTF2F2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GTF2F2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of GTF2F2P2 Gene:

GTF2F2P2
genes like me logo Genes that share expression patterns with GTF2F2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF2F2P2 Gene

Orthologs for GTF2F2P2 Gene

Evolution for GTF2F2P2 Gene

ENSEMBL:
Gene Tree for GTF2F2P2 (if available)
TreeFam:
Gene Tree for GTF2F2P2 (if available)

No data available for Orthologs for GTF2F2P2 Gene

Paralogs for GTF2F2P2 Gene

No data available for Paralogs for GTF2F2P2 Gene

Variants for GTF2F2P2 Gene

Additional Variant Information for GTF2F2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF2F2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF2F2P2 Gene

Disorders for GTF2F2P2 Gene

No disorders were found for GTF2F2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GTF2F2P2 Gene

Publications for GTF2F2P2 Gene

No publications were found for GTF2F2P2 Gene.

No data available for External Links for GTF2F2P2 Gene

Products for GTF2F2P2 Gene

Sources for GTF2F2P2 Gene

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