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Aliases for GTF2F2P1 Gene

Subcategory (RNA class) for GTF2F2P1 Gene

lncRNA

Aliases for GTF2F2P1 Gene

  • General Transcription Factor IIF Subunit 2 Pseudogene 1 2 3 5
  • General Transcription Factor IIF, Polypeptide 2 Pseudogene 1 2 3
  • General Transcription Factor IIF, Polypeptide 2, 30kDa Pseudogene 3
  • General Transcription Factor IIF, Polypeptide 2-Like 2
  • GTF2F2L 3
  • TFIIF 3

External Ids for GTF2F2P1 Gene

ORGUL Members for GTF2F2P1 Gene

Previous HGNC Symbols for GTF2F2P1 Gene

  • GTF2F2L

Previous GeneCards Identifiers for GTF2F2P1 Gene

  • GC04P148428

Summaries for GTF2F2P1 Gene

GeneCards Summary for GTF2F2P1 Gene

GTF2F2P1 (General Transcription Factor IIF Subunit 2 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GTF2F2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GTF2F2P1 Gene

Genomics for GTF2F2P1 Gene

GeneHancer (GH) Regulatory Elements for GTF2F2P1 Gene

Promoters and enhancers for GTF2F2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J147518 Enhancer 0.7 Ensembl 0.4 +12.9 12912 0.4 CTCF CREM RAD21 ZNF143 REST TRIM22 FOXA2 ZBTB20 RUNX3 FOXK2 EDNRA GC04P147523 GTF2F2P1
GH04J147497 Enhancer 0.5 Ensembl ENCODE 0.4 -7.6 -7570 1.7 FOS GTF2F2P1 GC04P147493 EDNRA
GH04J147509 Enhancer 0.3 Ensembl 0.7 +3.5 3512 0.4 ZNF610 EDNRA GTF2F2P1 GC04P147523
GH04J147513 Enhancer 0.2 Ensembl 0.4 +7.3 7312 0.8 GTF2F2P1 GC04P147523 EDNRA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GTF2F2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GTF2F2P1 Gene

Genomic Locations for GTF2F2P1 Gene
chr4:147,506,089-147,507,227
(GRCh38/hg38)
Size:
1,139 bases
Orientation:
Plus strand
chr4:148,427,241-148,428,379
(GRCh37/hg19)
Size:
1,139 bases
Orientation:
Plus strand

Genomic View for GTF2F2P1 Gene

Genes around GTF2F2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GTF2F2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GTF2F2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GTF2F2P1 Gene

Proteins for GTF2F2P1 Gene

Post-translational modifications for GTF2F2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GTF2F2P1 Gene

Domains & Families for GTF2F2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GTF2F2P1 Gene

Function for GTF2F2P1 Gene

Phenotypes From GWAS Catalog for GTF2F2P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GTF2F2P1 Gene

Localization for GTF2F2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GTF2F2P1 Gene

Pathways & Interactions for GTF2F2P1 Gene

PathCards logo

SuperPathways for GTF2F2P1 Gene

No Data Available

Interacting Proteins for GTF2F2P1 Gene

Gene Ontology (GO) - Biological Process for GTF2F2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GTF2F2P1 Gene

Drugs & Compounds for GTF2F2P1 Gene

No Compound Related Data Available

Transcripts for GTF2F2P1 Gene

mRNA/cDNA for GTF2F2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GTF2F2P1 Gene

No ASD Table

Relevant External Links for GTF2F2P1 Gene

GeneLoc Exon Structure for
GTF2F2P1
ECgene alternative splicing isoforms for
GTF2F2P1

Expression for GTF2F2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GTF2F2P1 Gene

mRNA differential expression in normal tissues according to GTEx for GTF2F2P1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x8.4).

NURSA nuclear receptor signaling pathways regulating expression of GTF2F2P1 Gene:

GTF2F2P1
genes like me logo Genes that share expression patterns with GTF2F2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GTF2F2P1 Gene

Orthologs for GTF2F2P1 Gene

Evolution for GTF2F2P1 Gene

ENSEMBL:
Gene Tree for GTF2F2P1 (if available)
TreeFam:
Gene Tree for GTF2F2P1 (if available)

No data available for Orthologs for GTF2F2P1 Gene

Paralogs for GTF2F2P1 Gene

No data available for Paralogs for GTF2F2P1 Gene

Variants for GTF2F2P1 Gene

Additional Variant Information for GTF2F2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GTF2F2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GTF2F2P1 Gene

Disorders for GTF2F2P1 Gene

No disorders were found for GTF2F2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GTF2F2P1 Gene

Publications for GTF2F2P1 Gene

  1. Combinatorial control of human RNA polymerase II (RNAP II) pausing and transcript cleavage by transcription factor IIF, hepatitis delta antigen, and stimulatory factor II. (PMID: 14506279) Zhang C … Burton ZF (The Journal of biological chemistry 2003) 3 23 58
  2. Genetic characterization of general transcription factors TFIIF and TFIIB of Homo sapiens sapiens. (PMID: 7835093) Purrello M … Grzeschik KH (Cytogenetics and cell genetics 1995) 2 3 58
  3. Analysis of factor interactions with RNA polymerase II elongation complexes using a new electrophoretic mobility shift assay. (PMID: 18832375) Cheng B … Price DH (Nucleic acids research 2008) 23 58
  4. Properties of RNA polymerase II elongation complexes before and after the P-TEFb-mediated transition into productive elongation. (PMID: 17548348) Cheng B … Price DH (The Journal of biological chemistry 2007) 23 58
  5. FCP1, a phosphatase specific for the heptapeptide repeat of the largest subunit of RNA polymerase II, stimulates transcription elongation. (PMID: 12370301) Mandal SS … Reinberg D (Molecular and cellular biology 2002) 3 58

Products for GTF2F2P1 Gene

Sources for GTF2F2P1 Gene

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