GSTA9P Gene (Pseudogene)

Glutathione S-Transferase Alpha 9, Pseudogene

GC06M052939
GIFtS:
5
See more...

Aliases for GSTA9P Gene

Aliases for GSTA9P Gene

  • Glutathione S-Transferase Alpha 9, Pseudogene 2 3 5
  • GSTA4P 2 3
  • GSTAP4 2 3
  • Glutathione S-Transferase Alpha 4 Pseudogene 3
  • GSTA9P 5

External Ids for GSTA9P Gene

Summaries for GSTA9P Gene

GeneCards Summary for GSTA9P Gene

GSTA9P (Glutathione S-Transferase Alpha 9, Pseudogene) is a Pseudogene.

Additional gene information for GSTA9P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GSTA9P Gene

Genomics for GSTA9P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for GSTA9P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J052975 Enhancer 0.7 Ensembl ENCODE 12.3 -18.9 -18890 2.8 CTCF CEBPG SPI1 EBF1 FOSL2 ATF4 CEBPB ATF3 RAD21 GSTA9P CILK1 GSTA3 RF00019-091 FJ601678-063 GSTA4
GH06J052986 Enhancer 0.2 Ensembl 6.8 -29.1 -29079 0.4 GSTA9P GSTA4 RF00019-091 GSTA3
GH06J052946 Enhancer 0.6 Ensembl 0.4 +11.2 11221 1 PRDM10 ZNF512 PRDM1 HDAC1 SOX6 HDAC2 NCOR1 TAL1 TCF12 KDM1A lnc-GSTA3-1 piR-38423-057 GSTA3 CILK1 GSTA9P GSTA4
GH06J052960 Enhancer 0.2 Ensembl 0.7 -2.6 -2619 0.7 piR-47162-137 GSTA9P GSTA4 GSTA3
GH06J052942 Enhancer 0.2 ENCODE 0.4 +15.0 15021 0.6 GSTA3 GSTA4 lnc-GSTA3-1 piR-38423-057 piR-40154-162 GSTA9P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GSTA9P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GSTA9P Gene

Genomic Locations for GSTA9P Gene
chr6:52,939,726-52,957,522
(GRCh38/hg38)
Size:
17,797 bases
Orientation:
Minus strand
chr6:52,804,524-52,822,320
(GRCh37/hg19)
Size:
17,797 bases
Orientation:
Minus strand

Genomic View for GSTA9P Gene

Genes around GSTA9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GSTA9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GSTA9P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for GSTA9P Gene

Proteins for GSTA9P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GSTA9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for GSTA9P Gene

Domains & Families for GSTA9P Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GSTA9P Gene

Function for GSTA9P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for GSTA9P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GSTA9P Gene

Localization for GSTA9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GSTA9P Gene

Pathways & Interactions for GSTA9P Gene

PathCards logo

SuperPathways for GSTA9P Gene

No Data Available

Gene Ontology (GO) - Biological Process for GSTA9P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GSTA9P Gene

Drugs & Compounds for GSTA9P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GSTA9P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for GSTA9P Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GSTA9P Gene

No ASD Table

Relevant External Links for GSTA9P Gene

GeneLoc Exon Structure for
GSTA9P

Expression for GSTA9P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GSTA9P Gene

mRNA expression in normal human tissues for GSTA9P Gene
mRNA expression by GTEx for GSTA9P Gene
genes like me logo Genes that share expression patterns with GSTA9P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GSTA9P Gene

Orthologs for GSTA9P Gene

Evolution for GSTA9P Gene

ENSEMBL:
Gene Tree for GSTA9P (if available)
TreeFam:
Gene Tree for GSTA9P (if available)

No data available for Orthologs for GSTA9P Gene

Paralogs for GSTA9P Gene

No data available for Paralogs for GSTA9P Gene

Variants for GSTA9P Gene

Additional Variant Information for GSTA9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GSTA9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GSTA9P Gene

Disorders for GSTA9P Gene

No disorders were found for GSTA9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GSTA9P Gene

Publications for GSTA9P Gene

  1. The human glutathione transferase alpha locus: genomic organization of the gene cluster and functional characterization of the genetic polymorphism in the hGSTA1 promoter. (PMID: 12042665) Morel F … Guillouzo A (Pharmacogenetics 2002) 2 3
  2. Comparative genomics search for losses of long-established genes on the human lineage. (PMID: 18085818) Zhu J … Haussler D (PLoS computational biology 2007) 3

ExternalLinks

View latest publications for GSTA9P gene in Mastermind

Products for GSTA9P Gene

Sources for GSTA9P Gene