Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GSTA7P Gene

Subcategory (RNA class) for GSTA7P Gene

lncRNA

Aliases for GSTA7P Gene

  • Glutathione S-Transferase Alpha 7, Pseudogene 2 3 5
  • Glutathione S-Transferase Alpha Pseudogene 2 2 3
  • Glutathione-S-Transferase A Pseudogene 2 3
  • Glutathione S-Transferase A Pseudogene 2 2
  • GSTAP6 3
  • GSTAP2 3

External Ids for GSTA7P Gene

ORGUL Members for GSTA7P Gene

Previous HGNC Symbols for GSTA7P Gene

  • GSTAP2

Previous GeneCards Identifiers for GSTA7P Gene

  • GC06U901653
  • GC06M052606
  • GC06M052435

Summaries for GSTA7P Gene

GeneCards Summary for GSTA7P Gene

GSTA7P (Glutathione S-Transferase Alpha 7, Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GSTA7P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GSTA7P Gene

Genomics for GSTA7P Gene

GeneHancer (GH) Regulatory Elements for GSTA7P Gene

Promoters and enhancers for GSTA7P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J052745 Enhancer 0.8 ENCODE 600.7 -1.0 -983 1 CEBPG SP1 HNF1A ZNF384 RXRA CEBPA GATAD2A RXRB FOXA2 ZNF316 GSTA7P GSTA1 PIR35670
GH06J052803 Promoter 1.6 EPDnew Ensembl 7.9 -57.2 -57242 3.2 CEBPG RERE MAFK PPARG ZNF644 KAT8 CEBPA GATAD2A NFKBIZ RXRB GSTA1 GSTA2 GSTA7P GC06P052798
GH06J052856 Enhancer 1 Ensembl ENCODE 6.6 -111.1 -111142 1.4 ELF3 SP5 ZNF644 KAT8 ZIC2 GATAD2A FOXK2 FOXA2 SAP130 MIER3 GSTA1 GSTA3 ICK GSTA7P GC06P052867 GSTA11P GSTA5
GH06J052787 Enhancer 1 Ensembl ENCODE 6.4 -43.6 -43573 2.7 CEBPG MAFK SP1 HNF1A RXRA CEBPA GATAD2A RXRB FOXA2 ZNF316 GSTA1 GSTA7P GC06M052785 PIR59486 GSTA12P
GH06J052749 Enhancer 0.4 Ensembl 11.7 -4.5 -4542 1 CBFA2T2 TCF12 CBFA2T3 GSTA7P GSTA3 GSTA1 PIR35670 GSTA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GSTA7P on UCSC Golden Path with GeneCards custom track

Genomic Locations for GSTA7P Gene

Genomic Locations for GSTA7P Gene
chr6:52,739,463-52,745,159
(GRCh38/hg38)
Size:
5,697 bases
Orientation:
Minus strand
chr6:52,604,261-52,609,957
(GRCh37/hg19)
Size:
5,697 bases
Orientation:
Minus strand

Genomic View for GSTA7P Gene

Genes around GSTA7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GSTA7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GSTA7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GSTA7P Gene

Proteins for GSTA7P Gene

Post-translational modifications for GSTA7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for GSTA7P Gene

Domains & Families for GSTA7P Gene

Gene Families for GSTA7P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with GSTA7P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GSTA7P Gene

Function for GSTA7P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GSTA7P Gene

Localization for GSTA7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GSTA7P Gene

Pathways & Interactions for GSTA7P Gene

PathCards logo

SuperPathways for GSTA7P Gene

No Data Available

Interacting Proteins for GSTA7P Gene

Gene Ontology (GO) - Biological Process for GSTA7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GSTA7P Gene

Drugs & Compounds for GSTA7P Gene

No Compound Related Data Available

Transcripts for GSTA7P Gene

mRNA/cDNA for GSTA7P Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for GSTA7P Gene

Glutathione S-transferase alpha 7, pseudogene:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GSTA7P Gene

No ASD Table

Relevant External Links for GSTA7P Gene

GeneLoc Exon Structure for
GSTA7P
ECgene alternative splicing isoforms for
GSTA7P

Expression for GSTA7P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GSTA7P Gene

mRNA differential expression in normal tissues according to GTEx for GSTA7P Gene

This gene is overexpressed in Liver (x32.1), Pancreas (x10.0), and Adrenal Gland (x6.1).

NURSA nuclear receptor signaling pathways regulating expression of GSTA7P Gene:

GSTA7P

SOURCE GeneReport for Unigene cluster for GSTA7P Gene:

Hs.742634
genes like me logo Genes that share expression patterns with GSTA7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GSTA7P Gene

Orthologs for GSTA7P Gene

Evolution for GSTA7P Gene

ENSEMBL:
Gene Tree for GSTA7P (if available)
TreeFam:
Gene Tree for GSTA7P (if available)

No data available for Orthologs for GSTA7P Gene

Paralogs for GSTA7P Gene

No data available for Paralogs for GSTA7P Gene

Variants for GSTA7P Gene

Sequence variations from dbSNP and Humsavar for GSTA7P Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000410886 -- 52,744,782(-) A/G non_coding_transcript_variant
rs1000880886 -- 52,743,731(-) C/A non_coding_transcript_variant
rs1001008730 -- 52,739,088(-) TTATTTAT/TTAT downstream_transcript_variant
rs1001291900 -- 52,741,663(-) A/T non_coding_transcript_variant
rs1001661201 -- 52,741,440(-) A/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for GSTA7P Gene

Variant ID Type Subtype PubMed ID
nsv462945 CNV loss 19166990
nsv470818 CNV loss 18288195
nsv523124 CNV loss 19592680
nsv603106 CNV loss 21841781
nsv970121 CNV duplication 23825009

Additional Variant Information for GSTA7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GSTA7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GSTA7P Gene

Disorders for GSTA7P Gene

Additional Disease Information for GSTA7P

No disorders were found for GSTA7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GSTA7P Gene

Publications for GSTA7P Gene

  1. Isolation and characterization of the human glutathione S-transferase A2 subunit gene. (PMID: 1329668) Röhrdanz E … Pickett CB (Archives of biochemistry and biophysics 1992) 2 3 58
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for GSTA7P Gene

Sources for GSTA7P Gene

Content
Loading form....