GSTA6P Gene (Pseudogene)

Glutathione S-Transferase Alpha 6, Pseudogene

GC06M052816
GIFtS:
7
See more...

Aliases for GSTA6P Gene

Aliases for GSTA6P Gene

  • Glutathione S-Transferase Alpha 6, Pseudogene 2 3 5
  • Glutathione S-Transferase Alpha Pseudogene 1 2 3
  • Glutathione S-Transferase A Pseudogene 1 2 3
  • GSTAP1 3
  • GSTA6P 5

External Ids for GSTA6P Gene

Previous HGNC Symbols for GSTA6P Gene

  • GSTAP1

Previous GeneCards Identifiers for GSTA6P Gene

  • GC06M052779
  • GC06M052671
  • GC06M052500

Summaries for GSTA6P Gene

GeneCards Summary for GSTA6P Gene

GSTA6P (Glutathione S-Transferase Alpha 6, Pseudogene) is a Pseudogene.

Additional gene information for GSTA6P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GSTA6P Gene

Genomics for GSTA6P Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for GSTA6P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J052814 Enhancer 1 Ensembl ENCODE 600.7 -2.0 -1986 1 GATAD2A CTCF SOX13 RCOR2 RBFOX2 RXRB SP1 TRIM22 DPF2 ZNF600 GSTA6P lnc-GSTA1-1 piR-45150 GSTA1 GSTA3 CILK1 GSTA5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GSTA6P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GSTA6P Gene

Genomic Locations for GSTA6P Gene
chr6:52,805,446-52,813,462
(GRCh38/hg38)
Size:
8,017 bases
Orientation:
Minus strand
chr6:52,670,244-52,678,260
(GRCh37/hg19)
Size:
8,017 bases
Orientation:
Minus strand

Genomic View for GSTA6P Gene

Genes around GSTA6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GSTA6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GSTA6P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for GSTA6P Gene

Proteins for GSTA6P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GSTA6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for GSTA6P Gene

Domains & Families for GSTA6P Gene

Gene Families for GSTA6P Gene

HGNC:
genes like me logo Genes that share domains with GSTA6P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GSTA6P Gene

Function for GSTA6P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
genes like me logo Genes that share phenotypes with GSTA6P: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GSTA6P Gene

Localization for GSTA6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GSTA6P Gene

Pathways & Interactions for GSTA6P Gene

PathCards logo

SuperPathways for GSTA6P Gene

No Data Available

Gene Ontology (GO) - Biological Process for GSTA6P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GSTA6P Gene

Drugs & Compounds for GSTA6P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GSTA6P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for GSTA6P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GSTA6P Gene

No ASD Table

Relevant External Links for GSTA6P Gene

GeneLoc Exon Structure for
GSTA6P

Expression for GSTA6P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GSTA6P Gene

mRNA expression in normal human tissues for GSTA6P Gene
mRNA expression by GTEx for GSTA6P Gene
genes like me logo Genes that share expression patterns with GSTA6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GSTA6P Gene

Orthologs for GSTA6P Gene

Evolution for GSTA6P Gene

ENSEMBL:
Gene Tree for GSTA6P (if available)
TreeFam:
Gene Tree for GSTA6P (if available)

No data available for Orthologs for GSTA6P Gene

Paralogs for GSTA6P Gene

No data available for Paralogs for GSTA6P Gene

Variants for GSTA6P Gene

Additional Variant Information for GSTA6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GSTA6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GSTA6P Gene

Disorders for GSTA6P Gene

No disorders were found for GSTA6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GSTA6P Gene

Publications for GSTA6P Gene

  1. Structure and organization of the human alpha class glutathione S-transferase genes and related pseudogenes. (PMID: 8307579) Suzuki T … Board PG (Genomics 1993) 2 3
  2. Association of glutathione-S-transferase-P1 (GST-P1) polymorphisms with bronchopulmonary dysplasia. (PMID: 14726935) Manar MH … Brown LA (Journal of perinatology : official journal of the California Perinatal Association 2004) 3
  3. Structure and function of the 5' flanking sequences of the human alpha class glutathione S-transferase genes. (PMID: 8185623) Suzuki T … Board PG (Biochemical and biophysical research communications 1994) 3

ExternalLinks

View latest publications for GSTA6P gene in Mastermind

Products for GSTA6P Gene

Sources for GSTA6P Gene