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Aliases for GSN-AS1 Gene

Subcategory (RNA class) for GSN-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GSN-AS1 Gene

  • GSN Antisense RNA 1 2 3 4 5
  • GSN Antisense RNA 1 (Non-Protein Coding) 2 3
  • C9orf31 3 4
  • MOST2 3 4
  • Putative Uncharacterized Protein GSN-AS1 4
  • Chromosome 9 Open Reading Frame 31 2
  • GSN Antisense Gene Protein 1 4
  • Protein MOST-2 4

External Ids for GSN-AS1 Gene

Previous HGNC Symbols for GSN-AS1 Gene

  • C9orf31

Previous GeneCards Identifiers for GSN-AS1 Gene

  • GC09M124046

Summaries for GSN-AS1 Gene

GeneCards Summary for GSN-AS1 Gene

GSN-AS1 (GSN Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GSN-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GSN-AS1 Gene

Genomics for GSN-AS1 Gene

GeneHancer (GH) Regulatory Elements for GSN-AS1 Gene

Promoters and enhancers for GSN-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GSN-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GSN-AS1 Gene

Genomic Locations for GSN-AS1 Gene
chr9:121,280,768-121,285,530
(GRCh38/hg38)
Size:
4,763 bases
Orientation:
Minus strand
chr9:124,043,046-124,047,808
(GRCh37/hg19)
Size:
4,763 bases
Orientation:
Minus strand

Genomic View for GSN-AS1 Gene

Genes around GSN-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GSN-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GSN-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GSN-AS1 Gene

Proteins for GSN-AS1 Gene

  • Protein details for GSN-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NRJ2-GSAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein GSN-AS1
    Protein Accession:
    Q9NRJ2

    Protein attributes for GSN-AS1 Gene

    Size:
    163 amino acids
    Molecular mass:
    17657 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GSN-AS1 Gene

Post-translational modifications for GSN-AS1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for GSN-AS1 Gene

Domains & Families for GSN-AS1 Gene

Protein Domains for GSN-AS1 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for GSN-AS1 Gene

GenScript: Design optimal peptide antigens:
  • Protein MOST-2 (CI031_HUMAN)

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with GSN-AS1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for GSN-AS1 Gene

Function for GSN-AS1 Gene

Phenotypes From GWAS Catalog for GSN-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GSN-AS1 Gene

Localization for GSN-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for GSN-AS1 gene
Compartment Confidence
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GSN-AS1 Gene

Pathways & Interactions for GSN-AS1 Gene

PathCards logo

SuperPathways for GSN-AS1 Gene

No Data Available

Interacting Proteins for GSN-AS1 Gene

Gene Ontology (GO) - Biological Process for GSN-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GSN-AS1 Gene

Drugs & Compounds for GSN-AS1 Gene

No Compound Related Data Available

Transcripts for GSN-AS1 Gene

mRNA/cDNA for GSN-AS1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GSN-AS1 Gene

No ASD Table

Relevant External Links for GSN-AS1 Gene

GeneLoc Exon Structure for
GSN-AS1
ECgene alternative splicing isoforms for
GSN-AS1

Expression for GSN-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GSN-AS1 Gene

genes like me logo Genes that share expression patterns with GSN-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GSN-AS1 Gene

Orthologs for GSN-AS1 Gene

Evolution for GSN-AS1 Gene

ENSEMBL:
Gene Tree for GSN-AS1 (if available)
TreeFam:
Gene Tree for GSN-AS1 (if available)

No data available for Orthologs for GSN-AS1 Gene

Paralogs for GSN-AS1 Gene

No data available for Paralogs for GSN-AS1 Gene

Variants for GSN-AS1 Gene

Sequence variations from dbSNP and Humsavar for GSN-AS1 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000288426 -- 121,286,657(-) G/A upstream_transcript_variant
rs1000498913 -- 121,286,687(-) G/A/C upstream_transcript_variant
rs1000902628 -- 121,281,665(-) A/T non_coding_transcript_variant
rs1001098646 -- 121,285,273(-) G/A non_coding_transcript_variant
rs1001170709 -- 121,283,459(-) G/A non_coding_transcript_variant

Additional Variant Information for GSN-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GSN-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GSN-AS1 Gene

Disorders for GSN-AS1 Gene

Additional Disease Information for GSN-AS1

No disorders were found for GSN-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GSN-AS1 Gene

Publications for GSN-AS1 Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray SJ … Dunham I (Nature 2004) 3 4 58

Products for GSN-AS1 Gene

Sources for GSN-AS1 Gene

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