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Aliases for GS1-594A7.3 Gene

Subcategory (RNA class) for GS1-594A7.3 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for GS1-594A7.3 Gene

  • Uncharacterized LOC104798195 3
  • Novel Transcript 5
  • AC097625.1 5

External Ids for GS1-594A7.3 Gene

Summaries for GS1-594A7.3 Gene

GeneCards Summary for GS1-594A7.3 Gene

GS1-594A7.3 (Uncharacterized LOC104798195) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for GS1-594A7.3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GS1-594A7.3 Gene

Genomics for GS1-594A7.3 Gene

GeneHancer (GH) Regulatory Elements for GS1-594A7.3 Gene

Promoters and enhancers for GS1-594A7.3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ015663 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE dbSUPER 11.9 +58.7 58720 16 ZNF652 ZNF704 RNF2 ZNF189 ZNF513 SMARCA4 CLTRN PIR ACE2 GS1-594A7.3 ZRSR2 CA5B PTMAP14 ENSG00000285602 CA5BP1
GH0XJ015579 Enhancer 1 Ensembl ENCODE 12.1 -23.2 -23234 3.3 CC2D1A CBFA2T2 TRIM24 SMARCA4 GMEB1 DPF2 IKZF1 ATF1 LEF1 HDAC1 PIR GS1-594A7.3 ACE2 CLTRN ENSG00000285602
GH0XJ015356 Enhancer 0.8 Ensembl ENCODE 11.2 -246.2 -246180 1 SP1 FOXA2 RBAK CEBPB JUND YY1 RAD21 HNF4A RXRA EGR1 PIGA ASB11 BMX PIR GS1-594A7.3 ACE2 VEGFD PIR-FIGF
GH0XJ015544 Enhancer 0.8 Ensembl 11.6 -55.4 -55381 5.4 CBFA2T2 TRIM24 SMARCA4 DPF2 IKZF1 NR2C1 ZNF316 EP300 CEBPB TCF12 PIR ACE2 GS1-594A7.3 BMX
GH0XJ015509 Enhancer 0.5 Ensembl 10.8 -91.9 -91881 3.6 NFE2 FOSL1 BHLHE40 FOS IKZF1 EMSY PIR ACE2 GS1-594A7.3 BMX
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GS1-594A7.3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GS1-594A7.3 Gene

Genomic Locations for GS1-594A7.3 Gene
chrX:15,602,881-15,621,484
(GRCh38/hg38)
Size:
18,604 bases
Orientation:
Plus strand
chrX:15,621,004-15,639,607
(GRCh37/hg19)
Size:
18,604 bases
Orientation:
Plus strand

Genomic View for GS1-594A7.3 Gene

Genes around GS1-594A7.3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GS1-594A7.3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GS1-594A7.3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GS1-594A7.3 Gene

Proteins for GS1-594A7.3 Gene

Post-translational modifications for GS1-594A7.3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GS1-594A7.3 Gene

Domains & Families for GS1-594A7.3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GS1-594A7.3 Gene

Function for GS1-594A7.3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GS1-594A7.3 Gene

Localization for GS1-594A7.3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GS1-594A7.3 Gene

Pathways & Interactions for GS1-594A7.3 Gene

PathCards logo

SuperPathways for GS1-594A7.3 Gene

No Data Available

Interacting Proteins for GS1-594A7.3 Gene

Gene Ontology (GO) - Biological Process for GS1-594A7.3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GS1-594A7.3 Gene

Drugs & Compounds for GS1-594A7.3 Gene

No Compound Related Data Available

Transcripts for GS1-594A7.3 Gene

mRNA/cDNA for GS1-594A7.3 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for GS1-594A7.3 Gene

No ASD Table

Relevant External Links for GS1-594A7.3 Gene

GeneLoc Exon Structure for
GS1-594A7.3

Expression for GS1-594A7.3 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GS1-594A7.3 Gene

Orthologs for GS1-594A7.3 Gene

Evolution for GS1-594A7.3 Gene

ENSEMBL:
Gene Tree for GS1-594A7.3 (if available)
TreeFam:
Gene Tree for GS1-594A7.3 (if available)

No data available for Orthologs for GS1-594A7.3 Gene

Paralogs for GS1-594A7.3 Gene

No data available for Paralogs for GS1-594A7.3 Gene

Variants for GS1-594A7.3 Gene

Sequence variations from dbSNP and Humsavar for GS1-594A7.3 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000480749 -- 15,619,762(+) T/C intron_variant
rs1000511316 -- 15,620,248(+) T/C intron_variant
rs1000882020 -- 15,610,936(+) A/G intron_variant
rs1001037984 -- 15,609,855(+) C/G/T intron_variant
rs1001265033 -- 15,617,987(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GS1-594A7.3 Gene

Disorders for GS1-594A7.3 Gene

No disorders were found for GS1-594A7.3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GS1-594A7.3 Gene

Publications for GS1-594A7.3 Gene

No publications were found for GS1-594A7.3 Gene.

No data available for External Links for GS1-594A7.3 Gene

Products for GS1-594A7.3 Gene

Sources for GS1-594A7.3 Gene

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