Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GS1-278J22.2 Gene

Subcategory (RNA class) for GS1-278J22.2 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for GS1-278J22.2 Gene

  • Uncharacterized GS1-278J22.2 3

External Ids for GS1-278J22.2 Gene

Summaries for GS1-278J22.2 Gene

GeneCards Summary for GS1-278J22.2 Gene

GS1-278J22.2 (Uncharacterized GS1-278J22.2) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for GS1-278J22.2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GS1-278J22.2 Gene

Genomics for GS1-278J22.2 Gene

GeneHancer (GH) Regulatory Elements for GS1-278J22.2 Gene

Promoters and enhancers for GS1-278J22.2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J053596 Enhancer 0.6 Ensembl ENCODE 0.3 -21.8 -21773 1 JUN FOS GS1-278J22.2 GC07M053699
GH07J053604 Enhancer 0.5 Ensembl ENCODE 0.3 -29.7 -29748 0.6 NANOG GS1-278J22.2 GC07M053699
GH07J053609 Enhancer 0.3 Ensembl 0.3 -35.1 -35073 0.4 USF1 GS1-278J22.2 GC07M053699
GH07J053659 Enhancer 0.4 Ensembl 0.2 -84.6 -84573 0.2 ZNF316 MAFK MAFF GC07M053699 GS1-278J22.2 LINC01446
GH07J053642 Enhancer 0.3 Ensembl 0.2 -69.1 -69073 2 NANOG GS1-278J22.2 GC07M053699
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GS1-278J22.2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GS1-278J22.2 Gene

Genomic Locations for GS1-278J22.2 Gene
chr7:53,564,198-53,574,528
(GRCh38/hg38)
Size:
10,331 bases
Orientation:
Minus strand

Genomic View for GS1-278J22.2 Gene

Genes around GS1-278J22.2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GS1-278J22.2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GS1-278J22.2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GS1-278J22.2 Gene

Proteins for GS1-278J22.2 Gene

Post-translational modifications for GS1-278J22.2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GS1-278J22.2 Gene

Domains & Families for GS1-278J22.2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GS1-278J22.2 Gene

Function for GS1-278J22.2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GS1-278J22.2 Gene

Localization for GS1-278J22.2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GS1-278J22.2 Gene

Pathways & Interactions for GS1-278J22.2 Gene

PathCards logo

SuperPathways for GS1-278J22.2 Gene

No Data Available

Interacting Proteins for GS1-278J22.2 Gene

Gene Ontology (GO) - Biological Process for GS1-278J22.2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GS1-278J22.2 Gene

Drugs & Compounds for GS1-278J22.2 Gene

No Compound Related Data Available

Transcripts for GS1-278J22.2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GS1-278J22.2 Gene

No ASD Table

Relevant External Links for GS1-278J22.2 Gene

GeneLoc Exon Structure for
GS1-278J22.2

No data available for mRNA/cDNA for GS1-278J22.2 Gene

Expression for GS1-278J22.2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GS1-278J22.2 Gene

Orthologs for GS1-278J22.2 Gene

No data available for Orthologs and Evolution for GS1-278J22.2 Gene

Paralogs for GS1-278J22.2 Gene

No data available for Paralogs for GS1-278J22.2 Gene

Variants for GS1-278J22.2 Gene

Sequence variations from dbSNP and Humsavar for GS1-278J22.2 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000034858 -- 53,565,923(-) G/A intron_variant
rs1000102422 -- 53,567,331(-) A/T intron_variant
rs1000224378 -- 53,576,240(-) T/A upstream_transcript_variant
rs1000248181 -- 53,571,360(-) C/G intron_variant
rs1000301909 -- 53,572,822(-) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GS1-278J22.2 Gene

Disorders for GS1-278J22.2 Gene

No disorders were found for GS1-278J22.2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GS1-278J22.2 Gene

Publications for GS1-278J22.2 Gene

No publications were found for GS1-278J22.2 Gene.

No data available for External Links for GS1-278J22.2 Gene

Products for GS1-278J22.2 Gene

Sources for GS1-278J22.2 Gene

Content
Loading form....