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Aliases for GRM7-AS1 Gene

Subcategory (RNA class) for GRM7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GRM7-AS1 Gene

  • GRM7 Antisense RNA 1 2 3 5
  • GRM7 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for GRM7-AS1 Gene

Previous GeneCards Identifiers for GRM7-AS1 Gene

  • GC00U933811

Summaries for GRM7-AS1 Gene

GeneCards Summary for GRM7-AS1 Gene

GRM7-AS1 (GRM7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GRM7-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GRM7-AS1 Gene

Genomics for GRM7-AS1 Gene

GeneHancer (GH) Regulatory Elements for GRM7-AS1 Gene

Promoters and enhancers for GRM7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J007504 Enhancer 1.1 FANTOM5 Ensembl ENCODE 11.6 +54.6 54638 3 CTCF REST CEBPB CHD2 JUN SP1 ATF3 JUND EP300 FOSL1 GRM7-AS1 GC03M007443 GC03M006543 GRM7
GH03J007630 Enhancer 0.8 Ensembl ENCODE 11.1 -70.8 -70780 1.4 BACH1 SP1 RXRA ATF2 NR2F2 RCOR1 ZNF644 RAD21 HNF4A GRM7-AS1 GC03P007641 GC03M007606 ENSG00000270207 GRM7
GH03J007382 Enhancer 0.7 Ensembl ENCODE 10.1 +177.5 177546 1.2 SP1 MNT HNF4A RXRA HNF4G GRM7-AS1 GC03M007443 GC03M006543 GRM7
GH03J007508 Enhancer 0.5 Ensembl ENCODE 11.6 +51.0 51032 1.4 EP300 GRM7-AS1 GC03M007443 GC03M006543 GRM7
GH03J007682 Enhancer 0.5 ENCODE 10.9 -122.8 -122789 1.2 SP1 HNF4A CEBPB EGR1 JUN NANOG GRM7-AS1 GC03P007641 ENSG00000270207 GRM7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GRM7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GRM7-AS1 Gene

Genomic Locations for GRM7-AS1 Gene
chr3:7,519,741-7,560,333
(GRCh38/hg38)
Size:
40,593 bases
Orientation:
Minus strand
chr3:7,561,428-7,602,020
(GRCh37/hg19)
Size:
40,593 bases
Orientation:
Minus strand

Genomic View for GRM7-AS1 Gene

Genes around GRM7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GRM7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GRM7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GRM7-AS1 Gene

Proteins for GRM7-AS1 Gene

Post-translational modifications for GRM7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GRM7-AS1 Gene

Domains & Families for GRM7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GRM7-AS1 Gene

Function for GRM7-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GRM7-AS1 Gene

Localization for GRM7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GRM7-AS1 Gene

Pathways & Interactions for GRM7-AS1 Gene

PathCards logo

SuperPathways for GRM7-AS1 Gene

No Data Available

Interacting Proteins for GRM7-AS1 Gene

Gene Ontology (GO) - Biological Process for GRM7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GRM7-AS1 Gene

Drugs & Compounds for GRM7-AS1 Gene

No Compound Related Data Available

Transcripts for GRM7-AS1 Gene

mRNA/cDNA for GRM7-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GRM7-AS1 Gene

No ASD Table

Relevant External Links for GRM7-AS1 Gene

GeneLoc Exon Structure for
GRM7-AS1
ECgene alternative splicing isoforms for
GRM7-AS1

Expression for GRM7-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GRM7-AS1 Gene

genes like me logo Genes that share expression patterns with GRM7-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GRM7-AS1 Gene

Orthologs for GRM7-AS1 Gene

Evolution for GRM7-AS1 Gene

ENSEMBL:
Gene Tree for GRM7-AS1 (if available)
TreeFam:
Gene Tree for GRM7-AS1 (if available)

No data available for Orthologs for GRM7-AS1 Gene

Paralogs for GRM7-AS1 Gene

No data available for Paralogs for GRM7-AS1 Gene

Variants for GRM7-AS1 Gene

Sequence variations from dbSNP and Humsavar for GRM7-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000083087 -- 7,532,715(-) G/C/T intron_variant
rs1000117269 -- 7,521,864(-) A/C/T intron_variant
rs1000515182 -- 7,521,678(-) G/A intron_variant
rs1000535414 -- 7,537,046(-) C/G/T upstream_transcript_variant
rs1000809684 -- 7,531,772(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GRM7-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2759128 CNV gain 17122850
esv3595196 CNV gain 21293372
esv3595197 CNV gain 21293372
esv3595198 CNV loss 21293372
nsv1006252 CNV gain 25217958
nsv1072663 CNV deletion 25765185
nsv589568 CNV gain 21841781
nsv834610 CNV gain 17160897
nsv997695 CNV loss 25217958

Additional Variant Information for GRM7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GRM7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GRM7-AS1 Gene

Disorders for GRM7-AS1 Gene

Additional Disease Information for GRM7-AS1

No disorders were found for GRM7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GRM7-AS1 Gene

Publications for GRM7-AS1 Gene

No publications were found for GRM7-AS1 Gene.

No data available for External Links for GRM7-AS1 Gene

Products for GRM7-AS1 Gene

Sources for GRM7-AS1 Gene

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