Aliases for GRM3-AS1 Gene

Subcategory (RNA class) for GRM3-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for GRM3-AS1 Gene

  • GRM3 Antisense RNA 1 2 3 5
  • GRM3-AS1 2 5
  • NONHSAG048121.2 91
  • Lnc-KIAA1324L-1 165
  • HSALNG0059352 164

External Ids for GRM3-AS1 Gene

Previous GeneCards Identifiers for GRM3-AS1 Gene

  • GC07U904974

Summaries for GRM3-AS1 Gene

GeneCards Summary for GRM3-AS1 Gene

GRM3-AS1 (GRM3 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GRM3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GRM3-AS1 Gene

Genomics for GRM3-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GRM3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J086802 Enhancer 0.2 Ensembl 600.7 +0.9 908 0.2 GRM3-AS1 LOC107986814 ENSG00000231255 LOC105375382 GRM3 ELAPOR2
GH07J086759 Enhancer 0.6 Ensembl ENCODE 12 +41.6 41608 4 TEAD4 NANOG POU5F1 JUND GRM3-AS1 GRM3 ENSG00000231255 HSALNG0059351 ELAPOR2
GH07J086786 Enhancer 0.2 Ensembl 0.4 +17.1 17108 0.2 LOC105375382 ENSG00000231255 GRM3-AS1 GRM3 ELAPOR2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GRM3-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GRM3-AS1 Gene

Genomic Locations for GRM3-AS1 Gene
chr7:86,780,296-86,803,409
(GRCh38/hg38)
Size:
23,114 bases
Orientation:
Minus strand
chr7:86,413,542-86,415,986
(GRCh37/hg19)
Size:
2,445 bases
Orientation:
Minus strand

Genomic View for GRM3-AS1 Gene

Genes around GRM3-AS1 on UCSC Golden Path with GeneCards custom track
GRM3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
GRM3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GRM3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GRM3-AS1 Gene

Proteins for GRM3-AS1 Gene

Post-translational modifications for GRM3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GRM3-AS1 Gene

Domains & Families for GRM3-AS1 Gene

Gene Families for GRM3-AS1 Gene

genes like me logo Genes that share domains with GRM3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GRM3-AS1 Gene

Function for GRM3-AS1 Gene

Phenotypes From GWAS Catalog for GRM3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GRM3-AS1 Gene

Localization for GRM3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GRM3-AS1 Gene

Pathways & Interactions for GRM3-AS1 Gene

PathCards logo

SuperPathways for GRM3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GRM3-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GRM3-AS1 Gene

Drugs & Compounds for GRM3-AS1 Gene

No Compound Related Data Available

Transcripts for GRM3-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for GRM3-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004574AE_9606 lncRNA 687 4

Ensembl: ENST00000452471 (view in UCSC) ,

LncBook: HSALNT0125186,

LNCipedia: lnc-KIAA1324L-1:2,

NONCODE: NONHSAT121804.2,

URS0000EEF1DA_9606 lncRNA 3684 2

HGNC: 40264,

Ensembl: ENST00000418031 (view in UCSC) ,

URS00001B61B3_9606 lncRNA 680 3

LncBook: HSALNT0125188,

LNCipedia: lnc-KIAA1324L-1:1,

NONCODE: NONHSAT121805.2,

URS00009C5259_9606 lncRNA 924 2

LncBook: HSALNT0125187,

NONCODE: NONHSAT213684.1,

URS0000EBBBD1_9606 lncRNA 3294 1

LncBook: HSALNT0125183,

GRM3-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for GRM3-AS1 Gene

No ASD Table

Relevant External Links for GRM3-AS1 Gene

GeneLoc Exon Structure for
GRM3-AS1

No data available for mRNA/cDNA for GRM3-AS1 Gene

Expression for GRM3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GRM3-AS1 Gene

Orthologs for GRM3-AS1 Gene

Evolution for GRM3-AS1 Gene

ENSEMBL:
Gene Tree for GRM3-AS1 (if available)
TreeFam:
Gene Tree for GRM3-AS1 (if available)

No data available for Orthologs for GRM3-AS1 Gene

Paralogs for GRM3-AS1 Gene

No data available for Paralogs for GRM3-AS1 Gene

Variants for GRM3-AS1 Gene

Additional dbSNP identifiers (rs#s) for GRM3-AS1 Gene

Additional Variant Information for GRM3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GRM3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GRM3-AS1 Gene

Disorders for GRM3-AS1 Gene

No disorders were found for GRM3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GRM3-AS1 Gene

Publications for GRM3-AS1 Gene

No publications were found for GRM3-AS1 Gene.

No data available for Mastermind for GRM3-AS1 Gene

Products for GRM3-AS1 Gene

Sources for GRM3-AS1 Gene