Aliases for GRHL3-AS1 Gene

Subcategory (RNA class) for GRHL3-AS1 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for GRHL3-AS1 Gene

  • GRHL3 Antisense RNA 1 2 3

External Ids for GRHL3-AS1 Gene

Summaries for GRHL3-AS1 Gene

GeneCards Summary for GRHL3-AS1 Gene

GRHL3-AS1 (GRHL3 Antisense RNA 1) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for GRHL3-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GRHL3-AS1 Gene

Genomics for GRHL3-AS1 Gene

GeneHancer (GH) Regulatory Elements for GRHL3-AS1 Gene

Promoters and enhancers for GRHL3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J024316 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 750.6 +1.7 1742 7.9 ZBTB40 ZBTB6 SMARCE1 RUNX1 L3MBTL2 MAX MNT TEAD4 SP1 ZNF148 ENSG00000232298 GRHL3 GRHL3-AS1 piR-42832 piR-62044
GH01J024307 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +13.1 13087 3.6 CTCF ZIC2 RAD21 SMC3 BCOR ZNF143 ZMYM3 KDM1A RF00017-106 lnc-GRHL3-2 GRHL3-AS1 ENSG00000232298
GH01J024310 Enhancer 0.4 Ensembl dbSUPER 0.4 +9.7 9688 1.6 ZBTB40 RF00017-106 GRHL3-AS1 ENSG00000232298 lnc-GRHL3-2
GH01J024315 Enhancer 0.3 Ensembl dbSUPER 0.4 +6.4 6387 0.2 GRHL3 RF00017-106 GRHL3-AS1 ENSG00000232298
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GRHL3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GRHL3-AS1 Gene

Genomic Locations for GRHL3-AS1 Gene
chr1:24,305,928-24,321,888
(GRCh38/hg38)
Size:
15,961 bases
Orientation:
Minus strand

Genomic View for GRHL3-AS1 Gene

Genes around GRHL3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GRHL3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GRHL3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GRHL3-AS1 Gene

Proteins for GRHL3-AS1 Gene

Post-translational modifications for GRHL3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GRHL3-AS1 Gene

Domains & Families for GRHL3-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GRHL3-AS1 Gene

Function for GRHL3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GRHL3-AS1 Gene

Localization for GRHL3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GRHL3-AS1 Gene

Pathways & Interactions for GRHL3-AS1 Gene

PathCards logo

SuperPathways for GRHL3-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GRHL3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GRHL3-AS1 Gene

Drugs & Compounds for GRHL3-AS1 Gene

No Compound Related Data Available

Transcripts for GRHL3-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GRHL3-AS1 Gene

No ASD Table

Relevant External Links for GRHL3-AS1 Gene

GeneLoc Exon Structure for
GRHL3-AS1
ECgene alternative splicing isoforms for
GRHL3-AS1

No data available for mRNA/cDNA for GRHL3-AS1 Gene

Expression for GRHL3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GRHL3-AS1 Gene

Orthologs for GRHL3-AS1 Gene

No data available for Orthologs and Evolution for GRHL3-AS1 Gene

Paralogs for GRHL3-AS1 Gene

No data available for Paralogs for GRHL3-AS1 Gene

Variants for GRHL3-AS1 Gene

Sequence variations from dbSNP and Humsavar for GRHL3-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000745971 -- 24,314,558(-) A/G intron_variant
rs1001413312 -- 24,311,708(-) G/A intron_variant
rs1001562891 -- 24,320,604(-) A/G intron_variant
rs1001582213 -- 24,323,675(-) A/G upstream_transcript_variant
rs1001884140 -- 24,313,367(-) A/T intron_variant

Additional Variant Information for GRHL3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GRHL3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GRHL3-AS1 Gene

Disorders for GRHL3-AS1 Gene

No disorders were found for GRHL3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GRHL3-AS1 Gene

Publications for GRHL3-AS1 Gene

No publications were found for GRHL3-AS1 Gene.

No data available for External Links for GRHL3-AS1 Gene

Products for GRHL3-AS1 Gene

Sources for GRHL3-AS1 Gene