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Aliases for GPX1P2 Gene

Aliases for GPX1P2 Gene

  • Glutathione Peroxidase Pseudogene 2 2 3 5
  • Glutathione Peroxidase 1 Pseudogene 3
  • GPXP2P 3
  • GPXL2 3
  • GPXL1 3
  • GPXP2 3

External Ids for GPX1P2 Gene

Previous HGNC Symbols for GPX1P2 Gene

  • GPXL1
  • GPXP2

Previous GeneCards Identifiers for GPX1P2 Gene

  • GC21M028515
  • GC21M013919

Summaries for GPX1P2 Gene

GeneCards Summary for GPX1P2 Gene

GPX1P2 (Glutathione Peroxidase Pseudogene 2) is a Pseudogene.

Additional gene information for GPX1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPX1P2 Gene

Genomics for GPX1P2 Gene

GeneHancer (GH) Regulatory Elements for GPX1P2 Gene

Promoters and enhancers for GPX1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J027143 Promoter 0.5 Ensembl 600.7 +0.4 398 0.8 GPX1P2 GC21M027144 GC21M027145 ADAMTS5
GH21J027171 Enhancer 0.5 Ensembl ENCODE 0.3 -27.7 -27707 0.6 CEBPB GPX1P2 LOC105372759
GH21J027201 Enhancer 0.5 Ensembl ENCODE 0.2 -57.4 -57392 0.4 FOS LOC105372759 GPX1P2 LOC102724355
GH21J027148 Enhancer 0.2 Ensembl 0.4 -5.0 -5002 0.4 GPX1P2 LOC105372759
GH21J027154 Enhancer 0.2 ENCODE 0.4 -11.0 -10958 0.1 GPX1P2 LOC105372759
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GPX1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GPX1P2 Gene

Genomic Locations for GPX1P2 Gene
chr21:27,143,123-27,143,999
(GRCh38/hg38)
Size:
877 bases
Orientation:
Minus strand
chr21:28,515,442-28,516,318
(GRCh37/hg19)
Size:
877 bases
Orientation:
Minus strand

Genomic View for GPX1P2 Gene

Genes around GPX1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GPX1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GPX1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPX1P2 Gene

Proteins for GPX1P2 Gene

Post-translational modifications for GPX1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GPX1P2 Gene

Domains & Families for GPX1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GPX1P2 Gene

Function for GPX1P2 Gene

Phenotypes From GWAS Catalog for GPX1P2 Gene

Phenotypes for GPX1P2 Gene

genes like me logo Genes that share phenotypes with GPX1P2: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GPX1P2 Gene

Localization for GPX1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GPX1P2 Gene

Pathways & Interactions for GPX1P2 Gene

PathCards logo

SuperPathways for GPX1P2 Gene

No Data Available

Interacting Proteins for GPX1P2 Gene

Gene Ontology (GO) - Biological Process for GPX1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GPX1P2 Gene

Drugs & Compounds for GPX1P2 Gene

No Compound Related Data Available

Transcripts for GPX1P2 Gene

mRNA/cDNA for GPX1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GPX1P2 Gene

No ASD Table

Relevant External Links for GPX1P2 Gene

GeneLoc Exon Structure for
GPX1P2
ECgene alternative splicing isoforms for
GPX1P2

Expression for GPX1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GPX1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of GPX1P2 Gene:

GPX1P2
genes like me logo Genes that share expression patterns with GPX1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GPX1P2 Gene

Orthologs for GPX1P2 Gene

Evolution for GPX1P2 Gene

ENSEMBL:
Gene Tree for GPX1P2 (if available)
TreeFam:
Gene Tree for GPX1P2 (if available)

No data available for Orthologs for GPX1P2 Gene

Paralogs for GPX1P2 Gene

No data available for Paralogs for GPX1P2 Gene

Variants for GPX1P2 Gene

Additional Variant Information for GPX1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GPX1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GPX1P2 Gene

Disorders for GPX1P2 Gene

Additional Disease Information for GPX1P2

Genetic Association Database
(GAD)

No disorders were found for GPX1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GPX1P2 Gene

Publications for GPX1P2 Gene

  1. A pseudogene for human glutathione peroxidase. (PMID: 1487153) Diamond AM … Hatfield D (Gene 1992) 2 3 58
  2. Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. (PMID: 21546767) Murea M … Freedman BI (American journal of nephrology 2011) 45 58
  3. Genome-wide association reveals genetic effects on human Aβ42 and τ protein levels in cerebrospinal fluids: a case control study. (PMID: 20932310) Han MR … Alzheimer's Disease Neuroimaging Initiative (BMC neurology 2010) 45 58
  4. A genomewide association study of citalopram response in major depressive disorder. (PMID: 19846067) Garriock HA … Hamilton SP (Biological psychiatry 2010) 45 58
  5. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M … Chromosome 21 mapping and sequencing consortium (Nature 2000) 3 58

Products for GPX1P2 Gene

Sources for GPX1P2 Gene

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