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Aliases for GPR50-AS1 Gene

Subcategory (RNA class) for GPR50-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GPR50-AS1 Gene

  • GPR50 Antisense RNA 1 2 3 5
  • GPR50 Antisense RNA 1 (Non-Protein Coding) 2 3

External Ids for GPR50-AS1 Gene

Previous GeneCards Identifiers for GPR50-AS1 Gene

  • GC0XU901748
  • GC0XM150345

Summaries for GPR50-AS1 Gene

GeneCards Summary for GPR50-AS1 Gene

GPR50-AS1 (GPR50 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GPR50-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPR50-AS1 Gene

Genomics for GPR50-AS1 Gene

GeneHancer (GH) Regulatory Elements for GPR50-AS1 Gene

Promoters and enhancers for GPR50-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ151177 Promoter/Enhancer 1.1 FANTOM5 Ensembl ENCODE 600.7 -0.3 -312 1.9 EZH2 SUZ12 GPR50 GPR50-AS1 ENSG00000269993
GH0XJ151176 Promoter 0.5 EPDnew 600.7 +1.3 1268 0.1 GPR50 GPR50-AS1 MIR4330
GH0XJ151151 Enhancer 0.6 Ensembl 13.6 +26.0 26035 0.4 CTCF RAD21 REST TRIM22 CEBPB SMC3 ZNF654 ZNF660 GPR50 GPR50-AS1 MIR4330 GC0XP151077
GH0XJ151145 Enhancer 0.3 Ensembl 12.4 +31.1 31135 3.4 EZH2 GPR50 GPR50-AS1 PRRG3 MIR4330 GC0XP151077
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GPR50-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GPR50-AS1 Gene

Genomic Locations for GPR50-AS1 Gene
chrX:151,175,192-151,177,836
(GRCh38/hg38)
Size:
2,645 bases
Orientation:
Minus strand
chrX:150,343,664-150,346,308
(GRCh37/hg19)
Size:
2,645 bases
Orientation:
Minus strand

Genomic View for GPR50-AS1 Gene

Genes around GPR50-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GPR50-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GPR50-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPR50-AS1 Gene

Proteins for GPR50-AS1 Gene

Post-translational modifications for GPR50-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GPR50-AS1 Gene

Domains & Families for GPR50-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GPR50-AS1 Gene

Function for GPR50-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GPR50-AS1 Gene

Localization for GPR50-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GPR50-AS1 Gene

Pathways & Interactions for GPR50-AS1 Gene

PathCards logo

SuperPathways for GPR50-AS1 Gene

No Data Available

Interacting Proteins for GPR50-AS1 Gene

Gene Ontology (GO) - Biological Process for GPR50-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GPR50-AS1 Gene

Drugs & Compounds for GPR50-AS1 Gene

No Compound Related Data Available

Transcripts for GPR50-AS1 Gene

mRNA/cDNA for GPR50-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GPR50-AS1 Gene

No ASD Table

Relevant External Links for GPR50-AS1 Gene

GeneLoc Exon Structure for
GPR50-AS1
ECgene alternative splicing isoforms for
GPR50-AS1

Expression for GPR50-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GPR50-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for GPR50-AS1 Gene

This gene is overexpressed in Pituitary (x49.1).
genes like me logo Genes that share expression patterns with GPR50-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GPR50-AS1 Gene

Orthologs for GPR50-AS1 Gene

Evolution for GPR50-AS1 Gene

ENSEMBL:
Gene Tree for GPR50-AS1 (if available)
TreeFam:
Gene Tree for GPR50-AS1 (if available)

No data available for Orthologs for GPR50-AS1 Gene

Paralogs for GPR50-AS1 Gene

No data available for Paralogs for GPR50-AS1 Gene

Variants for GPR50-AS1 Gene

Sequence variations from dbSNP and Humsavar for GPR50-AS1 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000717126 -- 151,177,236(-) C/T intron_variant
rs1000864690 -- 151,179,502(-) A/G upstream_transcript_variant
rs1001255852 -- 151,174,808(-) G/C downstream_transcript_variant
rs1001623658 -- 151,175,153(-) T/C downstream_transcript_variant
rs1002895906 -- 151,176,821(-) G/A non_coding_transcript_variant

Additional Variant Information for GPR50-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GPR50-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GPR50-AS1 Gene

Disorders for GPR50-AS1 Gene

Additional Disease Information for GPR50-AS1

No disorders were found for GPR50-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GPR50-AS1 Gene

Publications for GPR50-AS1 Gene

No publications were found for GPR50-AS1 Gene.

Products for GPR50-AS1 Gene

Sources for GPR50-AS1 Gene

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