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Aliases for GPAT2P1 Gene

Aliases for GPAT2P1 Gene

  • Glycerol-3-Phosphate Acyltransferase 2 Pseudogene 1 2 3 5
  • Glycerol-3-Phosphate Acyltransferase 2, Mitochondrial Pseudogene 3
  • Glycerol-3-Phosphate Acyltransferase 2 Pseuodgene 1 3

External Ids for GPAT2P1 Gene

Summaries for GPAT2P1 Gene

GeneCards Summary for GPAT2P1 Gene

GPAT2P1 (Glycerol-3-Phosphate Acyltransferase 2 Pseudogene 1) is a Pseudogene.

Additional gene information for GPAT2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPAT2P1 Gene

Genomics for GPAT2P1 Gene

GeneHancer (GH) Regulatory Elements for GPAT2P1 Gene

Promoters and enhancers for GPAT2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J095789 Promoter 0.5 Ensembl 600.7 +0.8 847 2.2 LOC105373492 GPAT2P1 PIR44378 GC02M095676
GH02J096155 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 13.7 +368.4 368386 4.2 SP1 ZFX CC2D1A NKRF POLR2A ZNF687 TRIM24 RELA CREM MLLT1 ADRA2B KANSL3 SNRNP200 GPAT2 GPAT2P1 ARID5A ZNF514 LMAN2L DUSP2 TMEM127
GH02J096406 Enhancer 0.9 ENCODE 14.3 +619.6 619568 5.1 ZNF652 CTCF ELF3 ZNF121 ZSCAN21 AHR TFE3 SP7 PRDM1 ZNF384 SNRNP200 ITPRIPL1 GPAT2P1 ANKRD36 CNNM3 KANSL3 ARID5A LOC105373496 CIAO1 ENSG00000230747
GH02J096142 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5.3 +356.4 356417 8.5 SP1 NKRF POLR2A ZNF687 MYC RELA KLF14 CREM MLLT1 EGR1 DUSP2 ENSG00000228873 PIR52948 GPAT2 ARID5A SNRNP200 CIAO1 TMEM127 KANSL3 GPAT2P1
GH02J095023 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5 -764.6 -764553 5.4 CTCF ZSCAN21 MLLT1 RAD21 PRDM10 BACH1 ZIC2 ZNF143 REST LARP7 MAL ENSG00000233850 CYP4F32P GPAT2P1 KCNIP3 TRIM43B RN7SL575P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GPAT2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GPAT2P1 Gene

Genomic Locations for GPAT2P1 Gene
chr2:95,789,654-95,800,191
(GRCh38/hg38)
Size:
10,538 bases
Orientation:
Plus strand
chr2:96,455,402-96,465,924
(GRCh37/hg19)
Size:
10,523 bases
Orientation:
Plus strand

Genomic View for GPAT2P1 Gene

Genes around GPAT2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GPAT2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GPAT2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPAT2P1 Gene

Proteins for GPAT2P1 Gene

Post-translational modifications for GPAT2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GPAT2P1 Gene

Domains & Families for GPAT2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GPAT2P1 Gene

Function for GPAT2P1 Gene

Phenotypes From GWAS Catalog for GPAT2P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GPAT2P1 Gene

Localization for GPAT2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GPAT2P1 Gene

Pathways & Interactions for GPAT2P1 Gene

PathCards logo

SuperPathways for GPAT2P1 Gene

No Data Available

Interacting Proteins for GPAT2P1 Gene

Gene Ontology (GO) - Biological Process for GPAT2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GPAT2P1 Gene

Drugs & Compounds for GPAT2P1 Gene

No Compound Related Data Available

Transcripts for GPAT2P1 Gene

mRNA/cDNA for GPAT2P1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GPAT2P1 Gene

No ASD Table

Relevant External Links for GPAT2P1 Gene

GeneLoc Exon Structure for
GPAT2P1
ECgene alternative splicing isoforms for
GPAT2P1

Expression for GPAT2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of GPAT2P1 Gene:

GPAT2P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GPAT2P1 Gene

Orthologs for GPAT2P1 Gene

Evolution for GPAT2P1 Gene

ENSEMBL:
Gene Tree for GPAT2P1 (if available)
TreeFam:
Gene Tree for GPAT2P1 (if available)

No data available for Orthologs for GPAT2P1 Gene

Paralogs for GPAT2P1 Gene

No data available for Paralogs for GPAT2P1 Gene

Variants for GPAT2P1 Gene

Additional Variant Information for GPAT2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GPAT2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GPAT2P1 Gene

Disorders for GPAT2P1 Gene

No disorders were found for GPAT2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GPAT2P1 Gene

Publications for GPAT2P1 Gene

No publications were found for GPAT2P1 Gene.

No data available for External Links for GPAT2P1 Gene

Products for GPAT2P1 Gene

Sources for GPAT2P1 Gene

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