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Aliases for GPAA1P2 Gene

Aliases for GPAA1P2 Gene

  • Glycosylphosphatidylinositol Anchor Attachment 1 Pseudogene 2 2 3 5

External Ids for GPAA1P2 Gene

Previous GeneCards Identifiers for GPAA1P2 Gene

  • GC00U936438

Summaries for GPAA1P2 Gene

GeneCards Summary for GPAA1P2 Gene

GPAA1P2 (Glycosylphosphatidylinositol Anchor Attachment 1 Pseudogene 2) is a Pseudogene.

Additional gene information for GPAA1P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPAA1P2 Gene

Genomics for GPAA1P2 Gene

GeneHancer (GH) Regulatory Elements for GPAA1P2 Gene

Promoters and enhancers for GPAA1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J109605 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 4.1 +776.5 776504 11.9 ZNF652 SP1 ELF3 MNT NKRF POLR2A CEBPG RERE ZNF384 ZNF687 SEPTIN10 RPL37P12 RANBP2 SOWAHC MTLN GPAA1P2 ENSG00000230696
GH02J111029 Enhancer 1.1 Ensembl ENCODE 4 -646.1 -646124 9.8 ELF3 TFE3 SP1 SP5 ZNF644 IKZF1 IKZF2 GATAD2A LARP7 POLR2A GPAA1P2 LOC442041 LINC01106 GC02M110971 ACOXL-AS1 ACOXL MIR4435-2HG
GH02J109986 Promoter/Enhancer 0.7 Ensembl dbSUPER 4.5 +399.8 399762 4 LINC01123 ZBTB45P1 GPAA1P2 LOC645135
GH02J110701 Enhancer 0.4 Ensembl 4.8 -314.9 -314938 2.6 ATF7 ATF2 CBX8 PIR62732 ACOXL GPAA1P2 PIR39914 PIRC10
GH02J110752 Enhancer 0.3 Ensembl 5.3 -364.8 -364838 0.8 USF1 LOC442041 GPAA1P2 ENSG00000184115 ACOXL GC02P114536
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GPAA1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GPAA1P2 Gene

Genomic Locations for GPAA1P2 Gene
chr2:110,386,377-110,388,163
(GRCh38/hg38)
Size:
1,787 bases
Orientation:
Minus strand
chr2:111,143,954-111,145,740
(GRCh37/hg19)
Size:
1,787 bases
Orientation:
Minus strand

Genomic View for GPAA1P2 Gene

Genes around GPAA1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GPAA1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GPAA1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPAA1P2 Gene

Proteins for GPAA1P2 Gene

Post-translational modifications for GPAA1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GPAA1P2 Gene

Domains & Families for GPAA1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GPAA1P2 Gene

Function for GPAA1P2 Gene

Phenotypes From GWAS Catalog for GPAA1P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GPAA1P2 Gene

Localization for GPAA1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GPAA1P2 Gene

Pathways & Interactions for GPAA1P2 Gene

PathCards logo

SuperPathways for GPAA1P2 Gene

No Data Available

Interacting Proteins for GPAA1P2 Gene

Gene Ontology (GO) - Biological Process for GPAA1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GPAA1P2 Gene

Drugs & Compounds for GPAA1P2 Gene

No Compound Related Data Available

Transcripts for GPAA1P2 Gene

mRNA/cDNA for GPAA1P2 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GPAA1P2 Gene

No ASD Table

Relevant External Links for GPAA1P2 Gene

GeneLoc Exon Structure for
GPAA1P2
ECgene alternative splicing isoforms for
GPAA1P2

Expression for GPAA1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of GPAA1P2 Gene:

GPAA1P2
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GPAA1P2 Gene

Orthologs for GPAA1P2 Gene

Evolution for GPAA1P2 Gene

ENSEMBL:
Gene Tree for GPAA1P2 (if available)
TreeFam:
Gene Tree for GPAA1P2 (if available)

No data available for Orthologs for GPAA1P2 Gene

Paralogs for GPAA1P2 Gene

No data available for Paralogs for GPAA1P2 Gene

Variants for GPAA1P2 Gene

Additional Variant Information for GPAA1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GPAA1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GPAA1P2 Gene

Disorders for GPAA1P2 Gene

No disorders were found for GPAA1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GPAA1P2 Gene

Publications for GPAA1P2 Gene

No publications were found for GPAA1P2 Gene.

No data available for External Links for GPAA1P2 Gene

Products for GPAA1P2 Gene

Sources for GPAA1P2 Gene

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