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Aliases for GPAA1P1 Gene

Aliases for GPAA1P1 Gene

  • Glycosylphosphatidylinositol Anchor Attachment 1 Pseudogene 1 2 3 5

External Ids for GPAA1P1 Gene

Previous GeneCards Identifiers for GPAA1P1 Gene

  • GC02U990115
  • GC02P110477
  • GC02P110099
  • GC02P110742
  • GC02M104208

Summaries for GPAA1P1 Gene

GeneCards Summary for GPAA1P1 Gene

GPAA1P1 (Glycosylphosphatidylinositol Anchor Attachment 1 Pseudogene 1) is a Pseudogene.

Additional gene information for GPAA1P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GPAA1P1 Gene

Genomics for GPAA1P1 Gene

GeneHancer (GH) Regulatory Elements for GPAA1P1 Gene

Promoters and enhancers for GPAA1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J109949 Promoter 0.5 Ensembl 0.3 -34.9 -34867 0.2 LOC440895 ENSG00000283684 ENSG00000186148 GPAA1P1 LIMS3-LOC440895 ENSG00000284337
GH02J109947 Promoter 0.5 Ensembl 0.3 -36.0 -35967 1.6 LOC440895 MTLN ENSG00000283684 ENSG00000186148 GPAA1P1 ENSG00000284337 LIMS3-LOC440895
GH02J109980 Enhancer 0.2 Ensembl 0.7 -3.0 -2968 0.4 GPAA1P1 LOC440895 ENSG00000283684
GH02J109976 Enhancer 0.2 Ensembl 0.4 -7.6 -7568 0.8 GPAA1P1 LOC440895 ENSG00000283684
GH02J109963 Enhancer 0.2 Ensembl 0.4 -20.0 -19967 0.4 GPAA1P1 LOC440895 ENSG00000283684 ENSG00000186148 LIMS3-LOC440895 ENSG00000284337
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GPAA1P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GPAA1P1 Gene

Genomic Locations for GPAA1P1 Gene
chr2:109,983,968-109,985,187
(GRCh38/hg38)
Size:
1,220 bases
Orientation:
Plus strand
chr2:110,741,545-110,742,764
(GRCh37/hg19)
Size:
1,220 bases
Orientation:
Plus strand

Genomic View for GPAA1P1 Gene

Genes around GPAA1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GPAA1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GPAA1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GPAA1P1 Gene

Proteins for GPAA1P1 Gene

Post-translational modifications for GPAA1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GPAA1P1 Gene

Domains & Families for GPAA1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GPAA1P1 Gene

Function for GPAA1P1 Gene

Molecular function for GPAA1P1 Gene

GENATLAS Biochemistry:
glycosylphosphatidylinositol anchor attachment protein 1,pseudogene 1

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GPAA1P1 Gene

Localization for GPAA1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GPAA1P1 Gene

Pathways & Interactions for GPAA1P1 Gene

PathCards logo

SuperPathways for GPAA1P1 Gene

No Data Available

Interacting Proteins for GPAA1P1 Gene

Gene Ontology (GO) - Biological Process for GPAA1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GPAA1P1 Gene

Drugs & Compounds for GPAA1P1 Gene

No Compound Related Data Available

Transcripts for GPAA1P1 Gene

mRNA/cDNA for GPAA1P1 Gene

(126) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GPAA1P1 Gene

No ASD Table

Relevant External Links for GPAA1P1 Gene

GeneLoc Exon Structure for
GPAA1P1
ECgene alternative splicing isoforms for
GPAA1P1

Expression for GPAA1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of GPAA1P1 Gene:

GPAA1P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GPAA1P1 Gene

Orthologs for GPAA1P1 Gene

Evolution for GPAA1P1 Gene

ENSEMBL:
Gene Tree for GPAA1P1 (if available)
TreeFam:
Gene Tree for GPAA1P1 (if available)

No data available for Orthologs for GPAA1P1 Gene

Paralogs for GPAA1P1 Gene

No data available for Paralogs for GPAA1P1 Gene

Variants for GPAA1P1 Gene

Additional Variant Information for GPAA1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GPAA1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GPAA1P1 Gene

Disorders for GPAA1P1 Gene

No disorders were found for GPAA1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GPAA1P1 Gene

Publications for GPAA1P1 Gene

  1. Human and mouse GPAA1 (Glycosylphosphatidylinositol anchor attachment 1) genes: genomic structures, chromosome loci and the presence of a minor class intron. (PMID: 10393431) Inoue N … Kinoshita T (Cytogenetics and cell genetics 1999) 2 3 58

Products for GPAA1P1 Gene

Sources for GPAA1P1 Gene

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