Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GOT2P2 Gene

Aliases for GOT2P2 Gene

  • Glutamic-Oxaloacetic Transaminase 2 Pseudogene 2 2 3 5
  • Glutamic-Oxaloacetic Transaminase 2, Mitochondrial (Aspartate Aminotransferase 2)(GOT2) Pseudogene 2 3
  • Glutamic-Oxaloacetic Transaminase 2-Like 2 Pseudogene 2 3
  • Glutamic-Oxaloacetic Transaminase 2-Like 2 2
  • GOT2L2 3

External Ids for GOT2P2 Gene

Previous HGNC Symbols for GOT2P2 Gene

  • GOT2L2

Previous GeneCards Identifiers for GOT2P2 Gene

  • GC01M144334

Summaries for GOT2P2 Gene

GeneCards Summary for GOT2P2 Gene

GOT2P2 (Glutamic-Oxaloacetic Transaminase 2 Pseudogene 2) is a Pseudogene. Among its related pathways are Valproic Acid Pathway, Pharmacodynamics.

Additional gene information for GOT2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOT2P2 Gene

Genomics for GOT2P2 Gene

GeneHancer (GH) Regulatory Elements for GOT2P2 Gene

Promoters and enhancers for GOT2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J173121 Enhancer 1.2 FANTOM5 ENCODE 0.4 +19.1 19063 2.7 ZFX ELF3 CEBPG BACH1 MAFK TFE3 SP7 SP1 HNF1A ZNF644 TNFSF18 GOT2P2 PIR51500
GH01J173127 Enhancer 0.9 ENCODE 0.4 +14.2 14201 2.2 ZNF652 CEBPG SP1 HNF1A PPARG ZNF644 RXRA SOX13 CEBPA GATAD2A TNFSF18 ENSG00000224228 GOT2P2 PIR51500
GH01J173112 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 +29.4 29371 4 CREM IKZF1 PRDM10 IKZF2 EED RUNX3 BCLAF1 BCL11A JUNB ATF2 TNFSF18 ENSG00000224228 GOT2P2 PIR51500
GH01J173149 Enhancer 0.7 Ensembl 0.4 -7.8 -7829 1.2 TRIM24 SP1 CREB1 CEBPA ATF1 PKNOX1 ATF7 BRCA1 CEBPB JUN GOT2P2 PIR52301
GH01J173116 Enhancer 0.5 Ensembl 0.3 +24.2 24171 3.2 CBFA2T2 ZNF512 HDAC1 TCF12 TAL1 TEAD4 CBFA2T3 TNFSF18 ENSG00000224228 GOT2P2 PIR51500
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GOT2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GOT2P2 Gene

Genomic Locations for GOT2P2 Gene
chr1:173,140,504-173,142,372
(GRCh38/hg38)
Size:
1,869 bases
Orientation:
Minus strand
chr1:173,110,039-173,111,511
(GRCh37/hg19)
Size:
1,473 bases
Orientation:
Minus strand

Genomic View for GOT2P2 Gene

Genes around GOT2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOT2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOT2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOT2P2 Gene

Proteins for GOT2P2 Gene

Post-translational modifications for GOT2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOT2P2 Gene

Domains & Families for GOT2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GOT2P2 Gene

Function for GOT2P2 Gene

Phenotypes From GWAS Catalog for GOT2P2 Gene

Phenotypes for GOT2P2 Gene

genes like me logo Genes that share phenotypes with GOT2P2: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOT2P2 Gene

Localization for GOT2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GOT2P2 Gene

Pathways & Interactions for GOT2P2 Gene

PathCards logo

SuperPathways for GOT2P2 Gene

genes like me logo Genes that share pathways with GOT2P2: view

Pathways by source for GOT2P2 Gene

1 PharmGKB pathway for GOT2P2 Gene

Interacting Proteins for GOT2P2 Gene

Gene Ontology (GO) - Biological Process for GOT2P2 Gene

None

No data available for SIGNOR curated interactions for GOT2P2 Gene

Drugs & Compounds for GOT2P2 Gene

No Compound Related Data Available

Transcripts for GOT2P2 Gene

mRNA/cDNA for GOT2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GOT2P2 Gene

No ASD Table

Relevant External Links for GOT2P2 Gene

GeneLoc Exon Structure for
GOT2P2
ECgene alternative splicing isoforms for
GOT2P2

Expression for GOT2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GOT2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of GOT2P2 Gene:

GOT2P2
genes like me logo Genes that share expression patterns with GOT2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOT2P2 Gene

Orthologs for GOT2P2 Gene

Evolution for GOT2P2 Gene

ENSEMBL:
Gene Tree for GOT2P2 (if available)
TreeFam:
Gene Tree for GOT2P2 (if available)

No data available for Orthologs for GOT2P2 Gene

Paralogs for GOT2P2 Gene

No data available for Paralogs for GOT2P2 Gene

Variants for GOT2P2 Gene

Additional Variant Information for GOT2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOT2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GOT2P2 Gene

Disorders for GOT2P2 Gene

No disorders were found for GOT2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GOT2P2 Gene

Publications for GOT2P2 Gene

No publications were found for GOT2P2 Gene.

Products for GOT2P2 Gene

Sources for GOT2P2 Gene

Content
Loading form....