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Aliases for GOT2P1 Gene

Aliases for GOT2P1 Gene

  • Glutamic-Oxaloacetic Transaminase 2 Pseudogene 1 2 3 5
  • Glutamic-Oxaloacetic Transaminase 2, Mitochondrial (Aspartate Aminotransferase 2) (GOT2) Pseudogene 2 3
  • Glutamic-Oxaloacetic Transaminase 2-Like 1 Pseudogene 2 3
  • Glutamic-Oxaloacetic Transaminase 2-Like 1 2
  • GOT2L1 3

External Ids for GOT2P1 Gene

Previous HGNC Symbols for GOT2P1 Gene

  • GOT2L1

Previous GeneCards Identifiers for GOT2P1 Gene

  • GC01P055834
  • GC01P053947

Summaries for GOT2P1 Gene

GeneCards Summary for GOT2P1 Gene

GOT2P1 (Glutamic-Oxaloacetic Transaminase 2 Pseudogene 1) is a Pseudogene. Among its related pathways are Valproic Acid Pathway, Pharmacodynamics.

Additional gene information for GOT2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOT2P1 Gene

Genomics for GOT2P1 Gene

GeneHancer (GH) Regulatory Elements for GOT2P1 Gene

Promoters and enhancers for GOT2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J055362 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.1 -4053 2.5 NFE2 MAFG NR2C2 FOSL1 JUN RNU6-830P GOT2P1 GC01M055291 ENSG00000234810
GH01J055352 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -14.4 -14436 2.1 ZNF24 GC01M055291 GOT2P1 ENSG00000234810
GH01J055354 Enhancer 0.4 ENCODE dbSUPER 0.4 -13.1 -13102 0.2 GOT2P1 GC01M055291 ENSG00000234810
GH01J055347 Enhancer 0.4 Ensembl ENCODE 0.4 -19.4 -19426 1.5 GC01M055291 ENSG00000234810 GOT2P1
GH01J055370 Enhancer 0.2 dbSUPER 0.7 +3.4 3406 1.2 RNU6-830P GOT2P1 MTCO2P34 ENSG00000234810
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GOT2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GOT2P1 Gene

Genomic Locations for GOT2P1 Gene
chr1:55,367,465-55,368,774
(GRCh38/hg38)
Size:
1,310 bases
Orientation:
Plus strand
chr1:55,833,138-55,834,447
(GRCh37/hg19)
Size:
1,310 bases
Orientation:
Plus strand

Genomic View for GOT2P1 Gene

Genes around GOT2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOT2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOT2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOT2P1 Gene

Proteins for GOT2P1 Gene

Post-translational modifications for GOT2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOT2P1 Gene

Domains & Families for GOT2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GOT2P1 Gene

Function for GOT2P1 Gene

Phenotypes From GWAS Catalog for GOT2P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOT2P1 Gene

Localization for GOT2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GOT2P1 Gene

Pathways & Interactions for GOT2P1 Gene

PathCards logo

SuperPathways for GOT2P1 Gene

genes like me logo Genes that share pathways with GOT2P1: view

Pathways by source for GOT2P1 Gene

1 PharmGKB pathway for GOT2P1 Gene

Interacting Proteins for GOT2P1 Gene

Gene Ontology (GO) - Biological Process for GOT2P1 Gene

None

No data available for SIGNOR curated interactions for GOT2P1 Gene

Drugs & Compounds for GOT2P1 Gene

No Compound Related Data Available

Transcripts for GOT2P1 Gene

mRNA/cDNA for GOT2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GOT2P1 Gene

No ASD Table

Relevant External Links for GOT2P1 Gene

GeneLoc Exon Structure for
GOT2P1
ECgene alternative splicing isoforms for
GOT2P1

Expression for GOT2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GOT2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of GOT2P1 Gene:

GOT2P1
genes like me logo Genes that share expression patterns with GOT2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOT2P1 Gene

Orthologs for GOT2P1 Gene

Evolution for GOT2P1 Gene

ENSEMBL:
Gene Tree for GOT2P1 (if available)
TreeFam:
Gene Tree for GOT2P1 (if available)

No data available for Orthologs for GOT2P1 Gene

Paralogs for GOT2P1 Gene

No data available for Paralogs for GOT2P1 Gene

Variants for GOT2P1 Gene

Additional Variant Information for GOT2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOT2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GOT2P1 Gene

Disorders for GOT2P1 Gene

Additional Disease Information for GOT2P1

Genetic Association Database
(GAD)

No disorders were found for GOT2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOT2P1 Gene

Publications for GOT2P1 Gene

  1. Electronic medical records and genomics (eMERGE) network exploration in cataract: several new potential susceptibility loci. (PMID: 25352737) Ritchie MD … McCarty CA (Molecular vision 2014) 3 58
  2. A genome-wide association study of inflammatory biomarker changes in response to fenofibrate treatment in the Genetics of Lipid Lowering Drug and Diet Network. (PMID: 22228203) Aslibekyan S … Arnett DK (Pharmacogenetics and genomics 2012) 45 58
  3. Genome-wide association study identifies multiple loci influencing human serum metabolite levels. (PMID: 22286219) Kettunen J … Ripatti S (Nature genetics 2012) 45 58
  4. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 45 58
  5. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 45 58

Products for GOT2P1 Gene

Sources for GOT2P1 Gene

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