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Aliases for GORAB-AS1 Gene

Subcategory (RNA class) for GORAB-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GORAB-AS1 Gene

  • GORAB Antisense RNA 1 2 3 5

External Ids for GORAB-AS1 Gene

Summaries for GORAB-AS1 Gene

GeneCards Summary for GORAB-AS1 Gene

GORAB-AS1 (GORAB Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with GORAB-AS1 include Geroderma Osteodysplastica.

Additional gene information for GORAB-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GORAB-AS1 Gene

Genomics for GORAB-AS1 Gene

GeneHancer (GH) Regulatory Elements for GORAB-AS1 Gene

Promoters and enhancers for GORAB-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J170530 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 608 +0.2 171 3.5 SP1 ZFX ZNF148 NKRF MLLT1 POLR2A GTF2F1 CSDE1 ZNF687 NFRKB GORAB GORAB-AS1 C1orf112 SCYL3 PRRC2C METTL18 RN7SL333P ENSG00000271811
GH01J170585 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE 10.8 -54.3 -54301 2.2 MLLT1 ZSCAN4 PKNOX1 NFE2 NR2F1 STAT1 GATA3 ATF7 ENSG00000225545 GORAB GORAB-AS1 PRRX1
GH01J170493 Promoter/Enhancer 1 Ensembl ENCODE 12 +38.1 38107 1.1 PRDM10 RBAK ZBTB11 JUN FEZF1 GORAB RN7SL333P METTL18 GORAB-AS1 PRRC2C HAUS4P1
GH01J170562 Enhancer 0.7 ENCODE 11.5 -30.6 -30554 1.9 ZNF148 ZNF687 IKZF1 FOSL2 POLR2A IKZF2 CHD2 JUN DPF2 JUND GORAB GORAB-AS1 KIFAP3 ENSG00000225545
GH01J170444 Enhancer 0.4 Ensembl ENCODE 18.6 +87.2 87174 2.3 GORAB-AS1 GORAB KIFAP3 HAUS4P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GORAB-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GORAB-AS1 Gene

Genomic Locations for GORAB-AS1 Gene
chr1:170,460,453-170,532,647
(GRCh38/hg38)
Size:
72,195 bases
Orientation:
Minus strand
chr1:170,429,594-170,501,788
(GRCh37/hg19)
Size:
72,195 bases
Orientation:
Minus strand

Genomic View for GORAB-AS1 Gene

Genes around GORAB-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GORAB-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GORAB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GORAB-AS1 Gene

Proteins for GORAB-AS1 Gene

Post-translational modifications for GORAB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GORAB-AS1 Gene

Domains & Families for GORAB-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GORAB-AS1 Gene

Function for GORAB-AS1 Gene

Phenotypes From GWAS Catalog for GORAB-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GORAB-AS1 Gene

Localization for GORAB-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GORAB-AS1 Gene

Pathways & Interactions for GORAB-AS1 Gene

PathCards logo

SuperPathways for GORAB-AS1 Gene

No Data Available

Interacting Proteins for GORAB-AS1 Gene

Gene Ontology (GO) - Biological Process for GORAB-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GORAB-AS1 Gene

Drugs & Compounds for GORAB-AS1 Gene

No Compound Related Data Available

Transcripts for GORAB-AS1 Gene

mRNA/cDNA for GORAB-AS1 Gene

(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(5) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for GORAB-AS1 Gene

No ASD Table

Relevant External Links for GORAB-AS1 Gene

GeneLoc Exon Structure for
GORAB-AS1
ECgene alternative splicing isoforms for
GORAB-AS1

Expression for GORAB-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GORAB-AS1 Gene

Orthologs for GORAB-AS1 Gene

Evolution for GORAB-AS1 Gene

ENSEMBL:
Gene Tree for GORAB-AS1 (if available)
TreeFam:
Gene Tree for GORAB-AS1 (if available)

No data available for Orthologs for GORAB-AS1 Gene

Paralogs for GORAB-AS1 Gene

No data available for Paralogs for GORAB-AS1 Gene

Variants for GORAB-AS1 Gene

Sequence variations from dbSNP and Humsavar for GORAB-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs151006839 uncertain-significance, Geroderma osteodysplastica 170,532,247(-) C/G intron_variant
rs1000041855 -- 170,479,154(-) C/A intron_variant
rs1000046338 -- 170,508,928(-) C/G/T intron_variant
rs1000051962 -- 170,471,849(-) C/G intron_variant
rs1000117133 -- 170,487,059(-) A/T intron_variant

Additional Variant Information for GORAB-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GORAB-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GORAB-AS1 Gene

Disorders for GORAB-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for GORAB-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
geroderma osteodysplastica
  • geroderma osteodysplasticum
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with GORAB-AS1: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for GORAB-AS1 Gene

Publications for GORAB-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

No data available for External Links for GORAB-AS1 Gene

Products for GORAB-AS1 Gene

Sources for GORAB-AS1 Gene

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