Aliases for GOLGA8N Gene

Aliases for GOLGA8N Gene

  • Golgin A8 Family Member N 2 3 5
  • Golgin Subfamily A Member 8N 3 4
  • Golgin A8 Family, Member N 2
  • GOLGA8R 3
  • GOLGA8N 5

External Ids for GOLGA8N Gene

Previous GeneCards Identifiers for GOLGA8N Gene

  • GC15P032891
  • GC15P032617

Summaries for GOLGA8N Gene

GeneCards Summary for GOLGA8N Gene

GOLGA8N (Golgin A8 Family Member N) is a Protein Coding gene. An important paralog of this gene is GOLGA8O.

Additional gene information for GOLGA8N Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GOLGA8N Gene

Genomics for GOLGA8N Gene

GeneHancer (GH) Regulatory Elements Pubs


GeneHancers around GOLGA8N on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for GOLGA8N

Genomic Locations for GOLGA8N Gene

Genomic Locations for GOLGA8N Gene
chr15:32,593,456-32,607,310
(GRCh38/hg38)
Size:
13,855 bases
Orientation:
Plus strand
chr15:32,885,657-32,896,179
(GRCh37/hg19)
Size:
10,523 bases
Orientation:
Plus strand

Genomic View for GOLGA8N Gene

Genes around GOLGA8N on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOLGA8N Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOLGA8N Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOLGA8N Gene

Proteins for GOLGA8N Gene

  • Protein details for GOLGA8N Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    F8WBI6-GOG8N_HUMAN
    Recommended name:
    Golgin subfamily A member 8N
    Protein Accession:
    F8WBI6

    Protein attributes for GOLGA8N Gene

    Size:
    632 amino acids
    Molecular mass:
    71524 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GOLGA8N Gene

Post-translational modifications for GOLGA8N Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for GOLGA8N Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for GOLGA8N Gene

Domains & Families for GOLGA8N Gene

Gene Families for GOLGA8N Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for GOLGA8N Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for GOLGA8N Gene

GenScript: Design optimal peptide antigens:
  • LOC643699 protein (Q3ZCM6_HUMAN)

Graphical View of Domain Structure for InterPro Entry

F8WBI6

UniProtKB/Swiss-Prot:

GOG8N_HUMAN :
  • Belongs to the GOLGA8 family.
Family:
  • Belongs to the GOLGA8 family.
genes like me logo Genes that share domains with GOLGA8N: view

Function for GOLGA8N Gene

Phenotypes for GOLGA8N Gene

genes like me logo Genes that share phenotypes with GOLGA8N: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOLGA8N Gene

Localization for GOLGA8N Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for GOLGA8N gene
Compartment Confidence
nucleus 3
golgi apparatus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for GOLGA8N Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000137 Golgi cis cisterna IBA 21873635
GO:0005794 Golgi apparatus IBA 21873635
GO:0005801 cis-Golgi network IBA 21873635
GO:0032580 Golgi cisterna membrane IBA 21873635
genes like me logo Genes that share ontologies with GOLGA8N: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for GOLGA8N Gene

Pathways & Interactions for GOLGA8N Gene

PathCards logo

SuperPathways for GOLGA8N Gene

No Data Available

Interacting Proteins for GOLGA8N Gene

Gene Ontology (GO) - Biological Process for GOLGA8N Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007030 Golgi organization IBA 21873635
GO:0051225 NOT spindle assembly IBA 21873635
genes like me logo Genes that share ontologies with GOLGA8N: view

No data available for Pathways by source and SIGNOR curated interactions for GOLGA8N Gene

Drugs & Compounds for GOLGA8N Gene

No Compound Related Data Available

Transcripts for GOLGA8N Gene

mRNA/cDNA for GOLGA8N Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GOLGA8N

Alternative Splicing Database (ASD) splice patterns (SP) for GOLGA8N Gene

No ASD Table

Relevant External Links for GOLGA8N Gene

GeneLoc Exon Structure for
GOLGA8N

Expression for GOLGA8N Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GOLGA8N Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for GOLGA8N

genes like me logo Genes that share expression patterns with GOLGA8N: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA8N Gene

Orthologs for GOLGA8N Gene

This gene was present in the common ancestor of chordates.

Orthologs for GOLGA8N Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia -- 31
  • 90 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia -- 31
  • 28 (a)
OneToMany
Mouse
(Mus musculus)
Mammalia Golga2 31
  • 28 (a)
OneToMany
Dog
(Canis familiaris)
Mammalia -- 31
  • 27 (a)
OneToMany
Oppossum
(Monodelphis domestica)
Mammalia -- 31
  • 26 (a)
OneToMany
Platypus
(Ornithorhynchus anatinus)
Mammalia -- 31
  • 26 (a)
OneToMany
Chicken
(Gallus gallus)
Aves -- 31
  • 23 (a)
OneToMany
Lizard
(Anolis carolinensis)
Reptilia -- 31
  • 21 (a)
OneToMany
Zebrafish
(Danio rerio)
Actinopterygii golga2 31
  • 17 (a)
OneToMany
Species where no ortholog for GOLGA8N was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for GOLGA8N Gene

ENSEMBL:
Gene Tree for GOLGA8N (if available)
TreeFam:
Gene Tree for GOLGA8N (if available)

Paralogs for GOLGA8N Gene

Pseudogenes.org Pseudogenes for GOLGA8N Gene

genes like me logo Genes that share paralogs with GOLGA8N: view

Variants for GOLGA8N Gene

Additional dbSNP identifiers (rs#s) for GOLGA8N Gene

Structural Variations from Database of Genomic Variants (DGV) for GOLGA8N Gene

Variant ID Type Subtype PubMed ID
dgv106n111 OTHER complex 26073780
dgv20e213 CNV loss 24956385
dgv2495n100 CNV loss 25217958
dgv2496n100 CNV gain 25217958
dgv2500n100 CNV gain+loss 25217958
dgv2503n100 CNV loss 25217958
dgv2504n100 CNV gain 25217958
dgv2505n100 CNV loss 25217958
dgv2514n100 CNV loss 25217958
dgv2517n100 CNV loss 25217958
dgv2518n100 CNV gain 25217958
dgv2520n100 CNV loss 25217958
dgv2523n100 CNV gain 25217958
dgv2524n100 CNV loss 25217958
dgv2525n100 CNV loss 25217958
dgv2526n100 CNV loss 25217958
dgv2527n100 CNV loss 25217958
dgv2528n100 CNV loss 25217958
dgv2529n100 CNV gain+loss 25217958
dgv2530n100 CNV gain 25217958
dgv2538n100 CNV loss 25217958
dgv2544n100 CNV gain+loss 25217958
dgv2547n100 CNV loss 25217958
dgv42e203 CNV gain+loss 21179565
dgv4417n54 CNV loss 21841781
dgv4425n54 CNV gain 21841781
dgv4456n54 CNV gain 21841781
esv24159 CNV gain+loss 19812545
esv2422296 CNV duplication 17116639
esv2751526 CNV loss 17911159
esv2760022 CNV gain+loss 17122850
esv2760023 CNV gain+loss 17122850
esv2760365 CNV gain+loss 21179565
esv33337 CNV gain+loss 17666407
esv3584688 CNV loss 24956385
esv3892661 CNV gain 25118596
nsv1049195 CNV gain 25217958
nsv1049226 CNV gain+loss 25217958
nsv1049639 CNV gain+loss 25217958
nsv1144733 CNV deletion 24896259
nsv1147043 CNV duplication 26484159
nsv1148560 OTHER inversion 26484159
nsv1160272 CNV duplication 26073780
nsv428300 CNV loss 18775914
nsv428302 CNV gain+loss 18775914
nsv433433 CNV gain 18776910
nsv469587 CNV loss 16826518
nsv483039 CNV gain 15286789
nsv517740 CNV gain+loss 19592680
nsv518720 CNV gain 19592680
nsv568748 CNV loss 21841781
nsv9232 CNV gain+loss 18304495
nsv9238 CNV gain+loss 18304495
nsv952605 CNV duplication 24416366
nsv977692 CNV duplication 23825009
nsv977695 CNV duplication 23825009

Variation tolerance for GOLGA8N Gene

Gene Damage Index Score: 0.02; 0.40% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for GOLGA8N Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOLGA8N

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for GOLGA8N Gene

Disorders for GOLGA8N Gene

No disorders were found for GOLGA8N Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA8N Gene

Publications for GOLGA8N Gene

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3
  2. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody MC … Nusbaum C (Nature 2006) 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for GOLGA8N Gene

Sources for GOLGA8N Gene