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Aliases for GOLGA8DP Gene

Aliases for GOLGA8DP Gene

  • Golgin A8 Family Member D, Pseudogene 2 3
  • Golgi Autoantigen, Golgin Subfamily A, 8D 2 3
  • GOLGA8D 3 4
  • Golgin A8 Family, Member D, Pseudogene 2
  • Golgin A8 Family Member E, Pseudogene 5
  • Putative Golgin Subfamily A Member 8D 4
  • GOLGA8EP 5

External Ids for GOLGA8DP Gene

Previous HGNC Symbols for GOLGA8DP Gene

  • GOLGA8D

Previous GeneCards Identifiers for GOLGA8DP Gene

  • GC15M022704
  • GC15P023888
  • GC15P023953
  • GC15P024191
  • GC15P023983
  • GC15P024017
  • GC15P024045
  • GC15P024071
  • GC15P024097
  • GC15P024124
  • GC15P024153
  • GC15P024172

Summaries for GOLGA8DP Gene

GeneCards Summary for GOLGA8DP Gene

GOLGA8DP (Golgin A8 Family Member D, Pseudogene) is a Pseudogene.

Additional gene information for GOLGA8DP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOLGA8DP Gene

Genomics for GOLGA8DP Gene

GeneHancer (GH) Regulatory Elements for GOLGA8DP Gene

Promoters and enhancers for GOLGA8DP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J023188 Enhancer 0.2 Ensembl 6 +34.1 34061 6.8 GOLGA8DP ENSG00000278541 ABCB10P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GOLGA8DP on UCSC Golden Path with GeneCards custom track

Genomic Locations for GOLGA8DP Gene

Genomic Locations for GOLGA8DP Gene
chr15:23,157,340-23,170,783
(GRCh38/hg38)
Size:
13,444 bases
Orientation:
Plus strand
chr15:22,702,285-22,715,728
(GRCh37/hg19)
Size:
13,444 bases
Orientation:
Minus strand

Genomic View for GOLGA8DP Gene

Genes around GOLGA8DP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOLGA8DP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOLGA8DP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOLGA8DP Gene

Proteins for GOLGA8DP Gene

  • Protein details for GOLGA8DP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q0D2H9-GOG8D_HUMAN
    Recommended name:
    Putative golgin subfamily A member 8D
    Protein Accession:
    Q0D2H9

    Protein attributes for GOLGA8DP Gene

    Size:
    430 amino acids
    Molecular mass:
    48423 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GOLGA8DP Gene

Post-translational modifications for GOLGA8DP Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOLGA8DP Gene

Domains & Families for GOLGA8DP Gene

Gene Families for GOLGA8DP Gene

Protein Domains for GOLGA8DP Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for GOLGA8DP Gene

GenScript: Design optimal peptide antigens:
  • Putative golgin subfamily A member 8D (GOG8D_HUMAN)

Graphical View of Domain Structure for InterPro Entry

Q0D2H9

UniProtKB/Swiss-Prot:

GOG8D_HUMAN :
  • Belongs to the GOLGA8 family.
Family:
  • Belongs to the GOLGA8 family.
genes like me logo Genes that share domains with GOLGA8DP: view

Function for GOLGA8DP Gene

Gene Ontology (GO) - Molecular Function for GOLGA8DP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with GOLGA8DP: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOLGA8DP Gene

Localization for GOLGA8DP Gene

Gene Ontology (GO) - Cellular Components for GOLGA8DP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000137 Golgi cis cisterna IBA 21873635
GO:0005794 Golgi apparatus IBA 21873635
GO:0005801 cis-Golgi network IBA 21873635
GO:0032580 Golgi cisterna membrane IBA 21873635
genes like me logo Genes that share ontologies with GOLGA8DP: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for GOLGA8DP Gene

Pathways & Interactions for GOLGA8DP Gene

PathCards logo

SuperPathways for GOLGA8DP Gene

No Data Available

Gene Ontology (GO) - Biological Process for GOLGA8DP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007030 Golgi organization IBA 21873635
GO:0051225 NOT spindle assembly IBA 21873635
genes like me logo Genes that share ontologies with GOLGA8DP: view

No data available for Pathways by source and SIGNOR curated interactions for GOLGA8DP Gene

Drugs & Compounds for GOLGA8DP Gene

No Compound Related Data Available

Transcripts for GOLGA8DP Gene

mRNA/cDNA for GOLGA8DP Gene

(6) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for GOLGA8DP Gene

Golgin A8 family, member D, pseudogene:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GOLGA8DP Gene

No ASD Table

Relevant External Links for GOLGA8DP Gene

GeneLoc Exon Structure for
GOLGA8DP
ECgene alternative splicing isoforms for
GOLGA8DP

Expression for GOLGA8DP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GOLGA8DP Gene

mRNA differential expression in normal tissues according to GTEx for GOLGA8DP Gene

This gene is overexpressed in Testis (x50.3).

NURSA nuclear receptor signaling pathways regulating expression of GOLGA8DP Gene:

GOLGA8DP

SOURCE GeneReport for Unigene cluster for GOLGA8DP Gene:

Hs.454647
genes like me logo Genes that share expression patterns with GOLGA8DP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA8DP Gene

Orthologs for GOLGA8DP Gene

Evolution for GOLGA8DP Gene

ENSEMBL:
Gene Tree for GOLGA8DP (if available)
TreeFam:
Gene Tree for GOLGA8DP (if available)

No data available for Orthologs for GOLGA8DP Gene

Paralogs for GOLGA8DP Gene

genes like me logo Genes that share paralogs with GOLGA8DP: view

No data available for Paralogs for GOLGA8DP Gene

Variants for GOLGA8DP Gene

Sequence variations from dbSNP and Humsavar for GOLGA8DP Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1002567257 -- 23,169,544(+) C/G/T non_coding_transcript_variant
rs1003427376 -- 23,159,472(+) A/G intron_variant
rs1005081956 -- 23,159,929(+) T/A non_coding_transcript_variant
rs1005113213 -- 23,163,566(+) A/G intron_variant
rs1008863714 -- 23,167,920(+) G/A non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for GOLGA8DP Gene

Variant ID Type Subtype PubMed ID
dgv2403n100 CNV gain 25217958
dgv2404n100 CNV gain 25217958
dgv2405n100 CNV gain+loss 25217958
dgv2406n100 CNV gain 25217958
dgv2407n100 CNV gain+loss 25217958
dgv2408n100 CNV loss 25217958
esv2474417 CNV loss 19546169
esv3892626 CNV gain+loss 25118596
nsv1036020 CNV loss 25217958
nsv1141255 CNV duplication 24896259
nsv433429 CNV gain 18776910
nsv442359 CNV gain+loss 18776908
nsv471379 CNV gain 19718026
nsv482175 CNV gain 20164927
nsv511042 OTHER inversion 20534489
nsv976888 CNV duplication 23825009

Additional Variant Information for GOLGA8DP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOLGA8DP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GOLGA8DP Gene

Disorders for GOLGA8DP Gene

Additional Disease Information for GOLGA8DP

No disorders were found for GOLGA8DP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA8DP Gene

Publications for GOLGA8DP Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T … Vidal M (Cell 2014) 3 58
  4. Systematic screening reveals a role for BRCA1 in the response to transcription-associated DNA damage. (PMID: 25184681) Hill SJ … Livingston DM (Genes & development 2014) 3 58
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3 58

Products for GOLGA8DP Gene

Sources for GOLGA8DP Gene

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