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Aliases for GOLGA8CP Gene

Aliases for GOLGA8CP Gene

  • Golgin A8 Family Member C, Pseudogene 2 3 5
  • Golgi Autoantigen, Golgin Subfamily A, 8C 2 3
  • GOLGA8C 3 4
  • Golgin A8 Family, Member C, Pseudogene 2
  • Golgin Subfamily A Member 8C 4
  • Golgin A8 Family, Member C 2

External Ids for GOLGA8CP Gene

Previous HGNC Symbols for GOLGA8CP Gene

  • GOLGA8C

Previous GeneCards Identifiers for GOLGA8CP Gene

  • GC15P020797
  • GC15P020813
  • GC15P020843
  • GC15P020577
  • GC15P020632
  • GC15P020882
  • GC15P020656
  • GC15P020679
  • GC15P020686
  • GC15P020703
  • GC15P020726
  • GC15P020752
  • GC15P020783
  • GC15P020781

Summaries for GOLGA8CP Gene

GeneCards Summary for GOLGA8CP Gene

GOLGA8CP (Golgin A8 Family Member C, Pseudogene) is a Pseudogene.

Additional gene information for GOLGA8CP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOLGA8CP Gene

Genomics for GOLGA8CP Gene

GeneHancer (GH) Regulatory Elements for GOLGA8CP Gene

Promoters and enhancers for GOLGA8CP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J020575 Enhancer 0.2 Ensembl 0.4 +14.4 14352 2.2 PIR58360 PIR45983 GOLGA8CP SPATA31E2P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GOLGA8CP on UCSC Golden Path with GeneCards custom track

Genomic Locations for GOLGA8CP Gene

Genomic Locations for GOLGA8CP Gene
chr15:20,562,349-20,575,703
(GRCh38/hg38)
Size:
13,355 bases
Orientation:
Plus strand
chr15:20,767,674-20,781,026
(GRCh37/hg19)
Size:
13,353 bases
Orientation:
Plus strand

Genomic View for GOLGA8CP Gene

Genes around GOLGA8CP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOLGA8CP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOLGA8CP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOLGA8CP Gene

Proteins for GOLGA8CP Gene

  • Protein details for GOLGA8CP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NN73-GOG8C_HUMAN
    Recommended name:
    Golgin subfamily A member 8C
    Protein Accession:
    A6NN73

    Protein attributes for GOLGA8CP Gene

    Size:
    597 amino acids
    Molecular mass:
    67128 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GOLGA8CP Gene

Post-translational modifications for GOLGA8CP Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOLGA8CP Gene

Domains & Families for GOLGA8CP Gene

Gene Families for GOLGA8CP Gene

Protein Domains for GOLGA8CP Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for GOLGA8CP Gene

GenScript: Design optimal peptide antigens:
  • Putative golgin subfamily A member 8C (GOG8C_HUMAN)

Graphical View of Domain Structure for InterPro Entry

A6NN73

UniProtKB/Swiss-Prot:

GOG8C_HUMAN :
  • Belongs to the GOLGA8 family.
Family:
  • Belongs to the GOLGA8 family.
genes like me logo Genes that share domains with GOLGA8CP: view

Function for GOLGA8CP Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOLGA8CP Gene

Localization for GOLGA8CP Gene

Gene Ontology (GO) - Cellular Components for GOLGA8CP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000137 Golgi cis cisterna IBA 21873635
GO:0005794 Golgi apparatus IBA 21873635
GO:0005801 cis-Golgi network IBA 21873635
GO:0032580 Golgi cisterna membrane IBA 21873635
genes like me logo Genes that share ontologies with GOLGA8CP: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for GOLGA8CP Gene

Pathways & Interactions for GOLGA8CP Gene

PathCards logo

SuperPathways for GOLGA8CP Gene

No Data Available

Interacting Proteins for GOLGA8CP Gene

Selected Interacting proteins: A6NN73-GOG8C_HUMAN for GOLGA8CP Gene via IID

Symbol External ID(s) Details
PRKCE

Gene Ontology (GO) - Biological Process for GOLGA8CP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007030 Golgi organization IBA 21873635
GO:0051225 NOT spindle assembly IBA 21873635
genes like me logo Genes that share ontologies with GOLGA8CP: view

No data available for Pathways by source and SIGNOR curated interactions for GOLGA8CP Gene

Drugs & Compounds for GOLGA8CP Gene

No Compound Related Data Available

Transcripts for GOLGA8CP Gene

mRNA/cDNA for GOLGA8CP Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GOLGA8CP Gene

No ASD Table

Relevant External Links for GOLGA8CP Gene

GeneLoc Exon Structure for
GOLGA8CP
ECgene alternative splicing isoforms for
GOLGA8CP

Expression for GOLGA8CP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GOLGA8CP Gene

mRNA differential expression in normal tissues according to GTEx for GOLGA8CP Gene

This gene is overexpressed in Testis (x49.9).

Protein differential expression in normal tissues from HIPED for GOLGA8CP Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for GOLGA8CP Gene



Protein tissue co-expression partners for GOLGA8CP Gene

NURSA nuclear receptor signaling pathways regulating expression of GOLGA8CP Gene:

GOLGA8CP
genes like me logo Genes that share expression patterns with GOLGA8CP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA8CP Gene

Orthologs for GOLGA8CP Gene

Evolution for GOLGA8CP Gene

ENSEMBL:
Gene Tree for GOLGA8CP (if available)
TreeFam:
Gene Tree for GOLGA8CP (if available)

No data available for Orthologs for GOLGA8CP Gene

Paralogs for GOLGA8CP Gene

genes like me logo Genes that share paralogs with GOLGA8CP: view

No data available for Paralogs for GOLGA8CP Gene

Variants for GOLGA8CP Gene

Sequence variations from dbSNP and Humsavar for GOLGA8CP Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1003155239 -- 20,563,340(+) C/T intron_variant
rs1003456395 -- 20,566,303(+) C/T non_coding_transcript_variant
rs1004914599 -- 20,562,221(+) C/A/G upstream_transcript_variant
rs1011830739 -- 20,566,327(+) A/G non_coding_transcript_variant
rs1012930534 -- 20,574,288(+) G/A non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for GOLGA8CP Gene

Variant ID Type Subtype PubMed ID
dgv1n1 OTHER inversion 15895083
dgv2174n100 CNV gain 25217958
dgv2175n100 CNV gain 25217958
dgv2179n100 CNV gain 25217958
dgv2181n100 CNV gain 25217958
dgv2182n100 CNV gain 25217958
dgv2183n100 CNV loss 25217958
dgv2186n100 CNV gain+loss 25217958
dgv2187n100 CNV gain 25217958
dgv2188n100 CNV loss 25217958
dgv2189n100 CNV gain+loss 25217958
dgv2190n100 CNV gain+loss 25217958
dgv2191n100 CNV gain+loss 25217958
dgv2192n100 CNV loss 25217958
dgv2193n100 CNV gain+loss 25217958
dgv2194n100 CNV loss 25217958
dgv2195n100 CNV loss 25217958
dgv2201n100 CNV gain 25217958
dgv2207n100 CNV loss 25217958
dgv2208n100 CNV gain 25217958
dgv2209n100 CNV gain+loss 25217958
dgv2210n100 CNV gain 25217958
dgv2211n100 CNV loss 25217958
dgv2212n100 CNV gain 25217958
dgv2213n100 CNV loss 25217958
dgv2214n100 CNV gain 25217958
dgv2215n100 CNV loss 25217958
dgv2217n100 CNV gain 25217958
dgv2222n100 CNV gain+loss 25217958
dgv2228n100 CNV gain 25217958
dgv2231n100 CNV gain+loss 25217958
dgv2232n100 CNV loss 25217958
dgv2233n100 CNV loss 25217958
dgv2236n100 CNV gain 25217958
dgv2237n100 CNV gain 25217958
dgv2238n100 CNV gain 25217958
dgv2244n100 CNV loss 25217958
dgv2245n100 CNV loss 25217958
dgv2246n100 CNV gain+loss 25217958
dgv2249n100 CNV gain+loss 25217958
dgv2250n100 CNV gain+loss 25217958
dgv2257n100 CNV gain 25217958
dgv2266n100 CNV loss 25217958
dgv2278n100 CNV gain 25217958
dgv2279n100 CNV loss 25217958
dgv2280n100 CNV loss 25217958
dgv2281n100 CNV gain+loss 25217958
dgv2282n100 CNV gain 25217958
dgv2283n100 CNV gain 25217958
dgv2284n100 CNV gain 25217958
dgv2407n100 CNV gain+loss 25217958
dgv2408n100 CNV loss 25217958
dgv2410n100 CNV gain 25217958
dgv28n68 CNV gain+loss 17160897
dgv4162n54 CNV loss 21841781
dgv4164n54 CNV loss 21841781
dgv4166n54 CNV gain 21841781
dgv4174n54 CNV loss 21841781
dgv4180n54 CNV gain 21841781
dgv4182n54 CNV loss 21841781
dgv4183n54 CNV loss 21841781
dgv4194n54 CNV loss 21841781
dgv4203n54 CNV loss 21841781
dgv4210n54 CNV gain 21841781
dgv4211n54 CNV gain 21841781
dgv43n16 CNV insertion 17901297
dgv91e55 CNV gain 17911159
dgv92e55 CNV gain 17911159
dgv93e55 CNV gain 17911159
dgv95e55 CNV loss 17911159
dgv96e55 CNV loss 17911159
esv1004259 OTHER inversion 20482838
esv21579 CNV gain+loss 19812545
esv2474417 CNV loss 19546169
esv2751488 CNV loss 17911159
esv28050 CNV gain+loss 19812545
esv29956 CNV loss 18421352
esv33051 CNV gain+loss 17666407
esv3397431 CNV duplication 20981092
esv3399758 CNV duplication 20981092
esv3569265 CNV gain 25503493
esv3584810 CNV gain 24956385
esv3584832 CNV gain 24956385
esv3892595 CNV gain+loss 25118596
esv3892607 CNV gain 25118596
esv3892626 CNV gain+loss 25118596
esv988919 CNV loss 20482838
nsv1035597 CNV gain 25217958
nsv1035969 CNV loss 25217958
nsv1075891 CNV duplication 25765185
nsv1078369 CNV duplication 25765185
nsv1110246 CNV duplication 24896259
nsv1141249 CNV duplication 24896259
nsv1152487 CNV duplication 26484159
nsv1160218 CNV duplication 26073780
nsv1452 CNV deletion 18451855
nsv428296 CNV gain+loss 18775914
nsv433426 CNV gain 18776910
nsv433430 CNV gain 18776910
nsv436198 CNV deletion 17901297
nsv511040 OTHER inversion 20534489
nsv511042 OTHER inversion 20534489
nsv567312 CNV gain 21841781
nsv7260 OTHER inversion 18451855
nsv819770 CNV gain 19587683
nsv821678 CNV loss 15273396
nsv832908 CNV gain 17160897
nsv9179 CNV gain+loss 18304495
nsv977648 CNV duplication 23825009

Additional Variant Information for GOLGA8CP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOLGA8CP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GOLGA8CP Gene

Disorders for GOLGA8CP Gene

Additional Disease Information for GOLGA8CP

No disorders were found for GOLGA8CP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA8CP Gene

Publications for GOLGA8CP Gene

  1. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody MC … Nusbaum C (Nature 2006) 3 4 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. (PMID: 21873635) Gaudet P … Thomas PD (Briefings in bioinformatics 2011) 3 58
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  5. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 3 58

Products for GOLGA8CP Gene

Sources for GOLGA8CP Gene

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