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Aliases for GOLGA6L9 Gene
Aliases for GOLGA6L9 Gene
External Ids for GOLGA6L9 Gene
- HGNC: 37229
- Entrez Gene: 440295
- Ensembl: ENSG00000197978
- UniProtKB: A6NEM1
Previous HGNC Symbols for GOLGA6L9 Gene
- GOLGA6L20
Previous GeneCards Identifiers for GOLGA6L9 Gene
- GC15P080512
- GC15P082722
- GC15P082415
Summaries for GOLGA6L9 Gene
GeneCards Summary for GOLGA6L9 Gene
GOLGA6L9 (Golgin A6 Family Like 9) is a Protein Coding gene. An important paralog of this gene is GOLGA6L10.
Additional gene information for GOLGA6L9 Gene
- HGNC(37229)
- Entrez Gene(440295)
- Ensembl(ENSG00000197978)
- UniProtKB(A6NEM1)
- Open Targets Platform(ENSG00000197978)
- Search for GOLGA6L9 at DataMed
- Search for GOLGA6L9 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GOLGA6L9 Gene
Genomics for GOLGA6L9 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for GOLGA6L9 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around GOLGA6L9 on the GeneHancer Hub at the UCSC Golden Path
Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for GOLGA6L9
Genomic Locations for GOLGA6L9 Gene
Genomic Locations for GOLGA6L9 Gene
- chr15:82,429,363-82,439,387
- (GRCh38/hg38)
- Size:
- 10,025 bases
- Orientation:
- Plus strand
- chr15:82,722,185-82,731,587
- (GRCh37/hg19)
- Size:
- 9,403 bases
- Orientation:
- Plus strand
Genomic View for GOLGA6L9 Gene
Genes around GOLGA6L9 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q25.2 by HGNC
- 15q25.2 by Entrez Gene
- 15q25.2 by Ensembl
GOLGA6L9 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for GOLGA6L9 Gene
Proteins for GOLGA6L9 Gene
-
Protein details for GOLGA6L9 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A6NEM1-GG6L9_HUMAN
- Recommended name:
- Golgin subfamily A member 6-like protein 9
- Protein Accession:
- A6NEM1
- A0A087WXJ1
- A6NFL8
- H0YK89
- Q8IVV3
Protein attributes for GOLGA6L9 Gene
- Size:
- 432 amino acids
- Molecular mass:
- 49193 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for GOLGA6L9 Gene
Other Protein References for GOLGA6L9 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Invitrogen Antibodies for GOLGA6L9 (AFLGC-GOLGA6L9)
- antibodies-online: Show 8 available GOLGA6L9 Antibodies ranked by validation data
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for GOLGA6L9
- Origene Custom Protein Services for GOLGA6L9
- Novus Biologicals proteins for GOLGA6L9
No data available for DME Specific Peptides for GOLGA6L9 Gene
Domains & Families for GOLGA6L9 Gene
Gene Families for GOLGA6L9 Gene
- HGNC:
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Suggested Antigen Peptide Sequences for GOLGA6L9 Gene
- GenScript: Design optimal peptide antigens:
-
- Golgin subfamily A member 6-like protein 9 (GG6L9_HUMAN)
Graphical View of Domain Structure for InterPro Entry
A6NEM1- Family:
-
- Belongs to the GOLGA6 family.
Function for GOLGA6L9 Gene
Phenotypes From GWAS Catalog for GOLGA6L9 Gene
Phenotypes for GOLGA6L9 Gene
- GenomeRNAi human phenotypes for GOLGA6L9:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for GOLGA6L9 - Select products 50% OFF >
- * GOLGA6L9 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for GOLGA6L9
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for GOLGA6L9
-
Santa Cruz Biotechnology (SCBT) CRISPR for GOLGA6L9
miRNA for GOLGA6L9 Gene
- miRTarBase miRNAs that target GOLGA6L9
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for GOLGA6L9
- Browse OriGene Inhibitory RNA Products For GOLGA6L9
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GOLGA6L9
Clone Products
- Applied Biological Materials (abm): Clones for GOLGA6L9 - Select products 50% OFF >
- * GOLGA6L9 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for GOLGA6L9
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for GOLGA6L9
Cell Line Products
-
Horizon Cell Lines for GOLGA6L9
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GOLGA6L9 Gene
Localization for GOLGA6L9 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 3 |
| golgi apparatus | 2 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005794 | Golgi apparatus | IEA | -- |
No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for GOLGA6L9 Gene
Pathways & Interactions for GOLGA6L9 Gene
Interacting Proteins for GOLGA6L9 Gene
Selected Interacting proteins:
A6NEM1-GG6L9_HUMAN
ENSP00000481078
for GOLGA6L9 Gene via
UniProtKB
STRING
IID
GPS-Prot Interaction Network for GOLGA6L9
No data available for Pathways by source and SIGNOR curated interactions for GOLGA6L9 Gene
Transcripts for GOLGA6L9 Gene
mRNA/cDNA for GOLGA6L9 Gene
- 2 REFSEQ mRNAs :
- 8 NCBI additional mRNA sequence :
- 3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000558668 534 nts (view in UCSC)
- ENST00000618348 1710 nts (view in UCSC)
- ENST00000618706 6549 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for GOLGA6L9 - Select products 50% OFF >
- * GOLGA6L9 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
-
OriGene CRISPR knockouts for GOLGA6L9
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for GOLGA6L9
-
Santa Cruz Biotechnology (SCBT) CRISPR for GOLGA6L9
miRNA Products
Inhibitory RNA Products
- Origene shrna, sirna, and RNAi products in human, mouse, rat for GOLGA6L9
- Browse OriGene Inhibitory RNA Products For GOLGA6L9
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GOLGA6L9
Clone Products
- Applied Biological Materials (abm): Clones for GOLGA6L9 - Select products 50% OFF >
- * GOLGA6L9 as ready-to-use vector or virus: ORF | Lenti- | Retro- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Sino Biological Human cDNA Clone for GOLGA6L9
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for GOLGA6L9
Relevant External Links for GOLGA6L9 Gene
- GeneLoc Exon Structure for
- GOLGA6L9
Expression for GOLGA6L9 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for GOLGA6L9
Primer Products
-
OriGene qPCR primer pairs for GOLGA6L9
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA6L9 Gene
Orthologs for GOLGA6L9 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | LOC744787 30 |
|
||
| -- 31 |
|
ManyToMany | |||
| -- 31 |
|
ManyToMany | |||
| Cow (Bos Taurus) |
Mammalia | -- 31 |
|
OneToMany | |
| Mouse (Mus musculus) |
Mammalia | Golga2 31 |
|
OneToMany | |
| Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
OneToMany | |
| Dog (Canis familiaris) |
Mammalia | -- 31 |
|
OneToMany | |
| Platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
OneToMany | |
| Chicken (Gallus gallus) |
Aves | -- 31 |
|
OneToMany | |
| Lizard (Anolis carolinensis) |
Reptilia | -- 31 |
|
OneToMany | |
| Zebrafish (Danio rerio) |
Actinopterygii | golga2 31 |
|
OneToMany |
- Species where no ortholog for GOLGA6L9 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rat (Rattus norvegicus)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Tropical Clawed Frog (Silurana tropicalis)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
Evolution for GOLGA6L9 Gene
- ENSEMBL:
- Gene Tree for GOLGA6L9 (if available)
- TreeFam:
- Gene Tree for GOLGA6L9 (if available)
- Aminode:
- Evolutionary constrained regions (ECRs) for GOLGA6L9: view image
Paralogs for GOLGA6L9 Gene
Paralogs for GOLGA6L9 Gene
(19) SIMAP similar genes for GOLGA6L9 Gene using alignment to 1 proteins:
- GG6L9_HUMAN
Variants for GOLGA6L9 Gene
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv1254n106 | CNV | deletion | 24896259 |
| esv21531 | CNV | gain+loss | 19812545 |
| esv22027 | CNV | gain+loss | 19812545 |
| esv2666932 | CNV | deletion | 23128226 |
| esv2668556 | CNV | deletion | 23128226 |
| esv999520 | CNV | gain | 20482838 |
| nsv1069872 | CNV | deletion | 25765185 |
| nsv1070718 | CNV | deletion | 25765185 |
| nsv1120052 | OTHER | inversion | 24896259 |
| nsv1136198 | CNV | deletion | 24896259 |
| nsv469699 | CNV | loss | 16826518 |
| nsv471686 | CNV | gain+loss | 15918152 |
| nsv9286 | CNV | gain+loss | 18304495 |
| nsv977744 | CNV | duplication | 23825009 |
| nsv977800 | CNV | duplication | 23825009 |
| nsv984102 | CNV | duplication | 23825009 |
Additional Variant Information for GOLGA6L9 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- GOLGA6L9
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for GOLGA6L9 Gene
Disorders for GOLGA6L9 Gene
Additional Disease Information for GOLGA6L9
No disorders were found for GOLGA6L9 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA6L9 Gene
Publications for GOLGA6L9 Gene
- A reference map of the human binary protein interactome. (PMID: 32296183) Luck K … Calderwood MA (Nature 2020) 3
- Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody MC … Nusbaum C (Nature 2006) 4
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
ExternalLinks
Products for GOLGA6L9 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for GOLGA6L9
- Origene Custom Protein Services for GOLGA6L9
- Origene shrna, sirna, and RNAi products in human, mouse, rat for GOLGA6L9
- Browse OriGene Inhibitory RNA Products For GOLGA6L9
- OriGene qPCR primer pairs for GOLGA6L9
- OriGene CRISPR knockouts for GOLGA6L9
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For GOLGA6L9
- Sino Biological Human cDNA Clone for GOLGA6L9
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse cDNA Clones
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals proteins for GOLGA6L9
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Invitrogen Antibodies for GOLGA6L9 (AFLGC-GOLGA6L9)
- VectorBuilder Custom and pre-made DNA vectors for GOLGA6L9 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for GOLGA6L9 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for GOLGA6L9 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for GOLGA6L9 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for GOLGA6L9
- antibodies-online: Show 8 available GOLGA6L9 Antibodies ranked by validation data
- antibodies-online: Search results for available GOLGA6L9 related products ranked by validation data
- antibodies-online: Search results for available GOLGA6L9 related products ranked by validation data
- Horizon Cell Lines for GOLGA6L9
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for GOLGA6L9
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for GOLGA6L9
- Search GeneCopoeia for miRNA 3'UTR Target clone products for GOLGA6L9
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GOLGA6L9
Sources for GOLGA6L9 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB