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Aliases for GOLGA6L5P Gene

Aliases for GOLGA6L5P Gene

  • Golgin A6 Family Like 5, Pseudogene 2 3
  • Golgi Autoantigen, Golgin Subfamily A, 6-Like 5 (Pseudogene) 2 3
  • Golgi Autoantigen, Golgin Subfamily A, 6-Like 8 2 3
  • Golgi Autoantigen, Golgin Subfamily A-Like Pseudogene 3
  • Golgin Subfamily A Member 6-Like Protein 8 3
  • Golgin A6 Family-Like 5, Pseudogene 5
  • GOLGA6L8 3
  • GOLGA6L5 3

External Ids for GOLGA6L5P Gene

Previous HGNC Symbols for GOLGA6L5P Gene

  • GOLGA6L5

Previous GeneCards Identifiers for GOLGA6L5P Gene

  • GC15M085050

Summaries for GOLGA6L5P Gene

GeneCards Summary for GOLGA6L5P Gene

GOLGA6L5P (Golgin A6 Family Like 5, Pseudogene) is a Pseudogene.

Additional gene information for GOLGA6L5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOLGA6L5P Gene

Genomics for GOLGA6L5P Gene

GeneHancer (GH) Regulatory Elements for GOLGA6L5P Gene

Promoters and enhancers for GOLGA6L5P Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GOLGA6L5P on UCSC Golden Path with GeneCards custom track

Genomic Locations for GOLGA6L5P Gene

Genomic Locations for GOLGA6L5P Gene
chr15:84,506,168-84,516,847
(GRCh38/hg38)
Size:
10,680 bases
Orientation:
Minus strand
chr15:85,047,738-85,060,078
(GRCh37/hg19)
Size:
12,341 bases
Orientation:
Minus strand

Genomic View for GOLGA6L5P Gene

Genes around GOLGA6L5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOLGA6L5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOLGA6L5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOLGA6L5P Gene

Proteins for GOLGA6L5P Gene

Post-translational modifications for GOLGA6L5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOLGA6L5P Gene

Domains & Families for GOLGA6L5P Gene

Gene Families for GOLGA6L5P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with GOLGA6L5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GOLGA6L5P Gene

Function for GOLGA6L5P Gene

Phenotypes From GWAS Catalog for GOLGA6L5P Gene

Phenotypes for GOLGA6L5P Gene

genes like me logo Genes that share phenotypes with GOLGA6L5P: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GOLGA6L5P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOLGA6L5P Gene

Localization for GOLGA6L5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GOLGA6L5P Gene

Pathways & Interactions for GOLGA6L5P Gene

PathCards logo

SuperPathways for GOLGA6L5P Gene

No Data Available

Interacting Proteins for GOLGA6L5P Gene

Gene Ontology (GO) - Biological Process for GOLGA6L5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GOLGA6L5P Gene

Drugs & Compounds for GOLGA6L5P Gene

No Compound Related Data Available

Transcripts for GOLGA6L5P Gene

mRNA/cDNA for GOLGA6L5P Gene

(1) REFSEQ mRNAs :
(9) Additional mRNA sequences :
(57) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for GOLGA6L5P

Alternative Splicing Database (ASD) splice patterns (SP) for GOLGA6L5P Gene

No ASD Table

Relevant External Links for GOLGA6L5P Gene

GeneLoc Exon Structure for
GOLGA6L5P
ECgene alternative splicing isoforms for
GOLGA6L5P

Expression for GOLGA6L5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GOLGA6L5P Gene

NURSA nuclear receptor signaling pathways regulating expression of GOLGA6L5P Gene:

GOLGA6L5P
genes like me logo Genes that share expression patterns with GOLGA6L5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA6L5P Gene

Orthologs for GOLGA6L5P Gene

Evolution for GOLGA6L5P Gene

ENSEMBL:
Gene Tree for GOLGA6L5P (if available)
TreeFam:
Gene Tree for GOLGA6L5P (if available)

No data available for Orthologs for GOLGA6L5P Gene

Paralogs for GOLGA6L5P Gene

No data available for Paralogs for GOLGA6L5P Gene

Variants for GOLGA6L5P Gene

Sequence variations from dbSNP and Humsavar for GOLGA6L5P Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000392690 -- 84,517,240(-) T/A upstream_transcript_variant
rs1000725456 -- 84,518,035(-) G/T upstream_transcript_variant
rs1001612677 -- 84,517,032(-) C/T upstream_transcript_variant
rs1001903353 -- 84,516,831(-) C/T non_coding_transcript_variant
rs1001939228 -- 84,517,761(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for GOLGA6L5P Gene

Variant ID Type Subtype PubMed ID
dgv2638n100 CNV gain 25217958
dgv2641n100 CNV loss 25217958
dgv2642n100 CNV gain+loss 25217958
esv2672879 CNV deletion 23128226
esv2677191 CNV deletion 23128226
esv2760048 CNV gain+loss 17122850
esv2761880 CNV gain 21179565
esv29772 CNV gain+loss 19812545
esv3442061 CNV duplication 20981092
esv3569809 CNV gain 25503493
esv3637089 CNV loss 21293372
nsv1139636 CNV duplication 24896259
nsv428310 CNV gain+loss 18775914
nsv518289 CNV loss 19592680
nsv9290 CNV gain+loss 18304495
nsv977000 CNV duplication 23825009
nsv984104 CNV duplication 23825009

Additional Variant Information for GOLGA6L5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOLGA6L5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GOLGA6L5P Gene

Disorders for GOLGA6L5P Gene

Additional Disease Information for GOLGA6L5P

No disorders were found for GOLGA6L5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA6L5P Gene

Publications for GOLGA6L5P Gene

  1. Characterization and Genetic Analyses of New Genes Coding for NOD2 Interacting Proteins. (PMID: 27812135) Thiébaut R … Ollendorff V (PloS one 2016) 3 58
  2. Comparison of an expanded ataxia interactome with patient medical records reveals a relationship between macular degeneration and ataxia. (PMID: 21078624) Kahle JJ … Zoghbi HY (Human molecular genetics 2011) 3 58
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  4. A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PMID: 16713569) Lim J … Zoghbi HY (Cell 2006) 3 58
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for GOLGA6L5P Gene

Sources for GOLGA6L5P Gene

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