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Aliases for GOLGA2P3Y Gene

Aliases for GOLGA2P3Y Gene

  • GOLGA2 Pseudogene 3 Y-Linked 2 3 5
  • Golgi Autoantigen, Golgin Subfamily A, 2-Like, Y-Linked 2 2 3
  • Golgin A2 Pseudogene 3, Y-Linked 2 3
  • Golgi Autoantigen, Golgin Subfamily A, 2-Like, Y-Linked, Telomeric 3
  • Golgin A2-Like, Y-Linked 2 (Pseudogene) 3
  • Golgin A2 Pseudogene 3 2
  • GOLGA2LY2 3
  • GOLGA2P3 3

External Ids for GOLGA2P3Y Gene

Previous HGNC Symbols for GOLGA2P3Y Gene

  • GOLGA2LY2
  • GOLGA2P3

Previous GeneCards Identifiers for GOLGA2P3Y Gene

  • GC0YP027602

Summaries for GOLGA2P3Y Gene

Entrez Gene Summary for GOLGA2P3Y Gene

  • There are two copies of this pseudogene within the P1 palindrome on chromosome Y. This record represents the more telomeric copy. [provided by RefSeq, Jul 2008]

GeneCards Summary for GOLGA2P3Y Gene

GOLGA2P3Y (GOLGA2 Pseudogene 3 Y-Linked) is a Pseudogene.

Additional gene information for GOLGA2P3Y Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GOLGA2P3Y Gene

Genomics for GOLGA2P3Y Gene

Genomic Locations for GOLGA2P3Y Gene

Genomic Locations for GOLGA2P3Y Gene
chrY:25,454,561-25,460,572
(GRCh38/hg38)
Size:
6,012 bases
Orientation:
Plus strand
chrY:27,600,708-27,606,719
(GRCh37/hg19)
Size:
6,012 bases
Orientation:
Plus strand

Genomic View for GOLGA2P3Y Gene

Genes around GOLGA2P3Y on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GOLGA2P3Y Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GOLGA2P3Y Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GOLGA2P3Y Gene

No data available for GeneHancer (GH) Regulatory Elements for GOLGA2P3Y Gene

Proteins for GOLGA2P3Y Gene

Post-translational modifications for GOLGA2P3Y Gene

No Post-translational modifications

No data available for DME Specific Peptides for GOLGA2P3Y Gene

Domains & Families for GOLGA2P3Y Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GOLGA2P3Y Gene

Function for GOLGA2P3Y Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GOLGA2P3Y Gene

Localization for GOLGA2P3Y Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GOLGA2P3Y Gene

Pathways & Interactions for GOLGA2P3Y Gene

PathCards logo

SuperPathways for GOLGA2P3Y Gene

No Data Available

Interacting Proteins for GOLGA2P3Y Gene

Gene Ontology (GO) - Biological Process for GOLGA2P3Y Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GOLGA2P3Y Gene

Drugs & Compounds for GOLGA2P3Y Gene

No Compound Related Data Available

Transcripts for GOLGA2P3Y Gene

mRNA/cDNA for GOLGA2P3Y Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Unigene Clusters for GOLGA2P3Y Gene

Golgin A2 pseudogene 3, Y-linked:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GOLGA2P3Y Gene

No ASD Table

Relevant External Links for GOLGA2P3Y Gene

GeneLoc Exon Structure for
GOLGA2P3Y
ECgene alternative splicing isoforms for
GOLGA2P3Y

Expression for GOLGA2P3Y Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GOLGA2P3Y Gene

NURSA nuclear receptor signaling pathways regulating expression of GOLGA2P3Y Gene:

GOLGA2P3Y

SOURCE GeneReport for Unigene cluster for GOLGA2P3Y Gene:

Hs.531603
genes like me logo Genes that share expression patterns with GOLGA2P3Y: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GOLGA2P3Y Gene

Orthologs for GOLGA2P3Y Gene

Evolution for GOLGA2P3Y Gene

ENSEMBL:
Gene Tree for GOLGA2P3Y (if available)
TreeFam:
Gene Tree for GOLGA2P3Y (if available)

No data available for Orthologs for GOLGA2P3Y Gene

Paralogs for GOLGA2P3Y Gene

No data available for Paralogs for GOLGA2P3Y Gene

Variants for GOLGA2P3Y Gene

Sequence variations from dbSNP and Humsavar for GOLGA2P3Y Gene

SNP ID Clin Chr 0Y pos Variation AA Info Type
rs111312539 -- 25,457,918(+) A/G intron_variant
rs111344291 -- 25,457,854(+) A/C intron_variant
rs111864622 -- 25,455,067(+) A/C upstream_transcript_variant
rs112002093 -- 25,453,683(+) G/T upstream_transcript_variant
rs112310595 -- 25,453,654(+) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for GOLGA2P3Y Gene

Variant ID Type Subtype PubMed ID
esv3575148 CNV loss 25503493
esv3575157 CNV loss 25503493
esv3575178 CNV loss 25503493
esv3575179 CNV loss 25503493
esv3577652 CNV gain 25503493
nsv1110653 CNV duplication 24896259
nsv1129124 CNV duplication 24896259
nsv1140105 CNV duplication 24896259
nsv1140106 CNV duplication 24896259
nsv1147594 CNV duplication 26484159
nsv1153003 CNV duplication 26484159
nsv442825 CNV gain+loss 18776908
nsv442826 CNV gain+loss 18776908
nsv515231 CNV loss 21397061

Additional Variant Information for GOLGA2P3Y Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GOLGA2P3Y

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GOLGA2P3Y Gene

Disorders for GOLGA2P3Y Gene

Additional Disease Information for GOLGA2P3Y

No disorders were found for GOLGA2P3Y Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GOLGA2P3Y Gene

Publications for GOLGA2P3Y Gene

  1. Deletion of GOLGA2P3Y but not GOLGA2P2Y is a risk factor for oligozoospermia. (PMID: 26655651) Sen S … Modi D (Reproductive biomedicine online 2016) 3 58
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H … Page DC (Nature 2003) 3 58

Products for GOLGA2P3Y Gene

Sources for GOLGA2P3Y Gene

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