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Aliases for GNPATP Gene

Aliases for GNPATP Gene

  • Glyceronephosphate O-Acyltransferase Pseudogene 2 3 5

External Ids for GNPATP Gene

Previous GeneCards Identifiers for GNPATP Gene

  • GC16U900800
  • GC16M059245

Summaries for GNPATP Gene

GeneCards Summary for GNPATP Gene

GNPATP (Glyceronephosphate O-Acyltransferase Pseudogene) is a Pseudogene.

Additional gene information for GNPATP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GNPATP Gene

Genomics for GNPATP Gene

GeneHancer (GH) Regulatory Elements for GNPATP Gene

Promoters and enhancers for GNPATP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J060658 Enhancer 0.2 FANTOM5 600.7 -1.4 -1378 0 GNPATP GC16P060661
GH16J060655 Enhancer 0.2 Ensembl 600.7 +0.9 948 0.2 GNPATP GC16M060585
GH16J060649 Enhancer 0.4 VISTA 0.4 +6.1 6099 1.5 CREB1 MAFK GNPATP GC16M060585
GH16J060642 Enhancer 0.4 Ensembl ENCODE 0.4 +13.5 13509 1.3 GNPATP GC16M060585
GH16J060635 Enhancer 0.4 Ensembl 0.3 +20.6 20648 1.6 RFX1 JUND GNPATP GC16M060585
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GNPATP on UCSC Golden Path with GeneCards custom track

Genomic Locations for GNPATP Gene

Genomic Locations for GNPATP Gene
chr16:60,654,071-60,656,649
(GRCh38/hg38)
Size:
2,579 bases
Orientation:
Minus strand
chr16:60,688,013-60,690,634
(GRCh37/hg19)
Size:
2,622 bases
Orientation:
Minus strand

Genomic View for GNPATP Gene

Genes around GNPATP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GNPATP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GNPATP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GNPATP Gene

Proteins for GNPATP Gene

Post-translational modifications for GNPATP Gene

No Post-translational modifications

No data available for DME Specific Peptides for GNPATP Gene

Domains & Families for GNPATP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GNPATP Gene

Function for GNPATP Gene

Phenotypes From GWAS Catalog for GNPATP Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GNPATP Gene

Localization for GNPATP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GNPATP Gene

Pathways & Interactions for GNPATP Gene

PathCards logo

SuperPathways for GNPATP Gene

No Data Available

Interacting Proteins for GNPATP Gene

Gene Ontology (GO) - Biological Process for GNPATP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GNPATP Gene

Drugs & Compounds for GNPATP Gene

No Compound Related Data Available

Transcripts for GNPATP Gene

mRNA/cDNA for GNPATP Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GNPATP Gene

No ASD Table

Relevant External Links for GNPATP Gene

GeneLoc Exon Structure for
GNPATP
ECgene alternative splicing isoforms for
GNPATP

Expression for GNPATP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GNPATP Gene

NURSA nuclear receptor signaling pathways regulating expression of GNPATP Gene:

GNPATP
genes like me logo Genes that share expression patterns with GNPATP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GNPATP Gene

Orthologs for GNPATP Gene

Evolution for GNPATP Gene

ENSEMBL:
Gene Tree for GNPATP (if available)
TreeFam:
Gene Tree for GNPATP (if available)

No data available for Orthologs for GNPATP Gene

Paralogs for GNPATP Gene

No data available for Paralogs for GNPATP Gene

Variants for GNPATP Gene

Additional Variant Information for GNPATP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GNPATP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GNPATP Gene

Disorders for GNPATP Gene

Additional Disease Information for GNPATP

Genetic Association Database
(GAD)

No disorders were found for GNPATP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GNPATP Gene

Publications for GNPATP Gene

  1. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 45 58
  2. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 45 58

Products for GNPATP Gene

Sources for GNPATP Gene

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