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Aliases for GNA14-AS1 Gene

Subcategory (RNA class) for GNA14-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GNA14-AS1 Gene

  • GNA14 Antisense RNA 1 2 3 5

External Ids for GNA14-AS1 Gene

Summaries for GNA14-AS1 Gene

GeneCards Summary for GNA14-AS1 Gene

GNA14-AS1 (GNA14 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GNA14-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GNA14-AS1 Gene

Genomics for GNA14-AS1 Gene

GeneHancer (GH) Regulatory Elements for GNA14-AS1 Gene

Promoters and enhancers for GNA14-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J077447 Enhancer 0.4 FANTOM5 600.7 -0.1 -131 0.3 NFYC GNA14-AS1 VPS13A GC09P077420 GNA14
GH09J077446 Enhancer 0.2 Ensembl 600.7 -1.4 -1448 0.4 GNA14-AS1 VPS13A GC09P077420 GNA14
GH09J077750 Enhancer 0.9 Ensembl ENCODE 11.1 +304.2 304175 3.2 CTCF CBFA2T2 TRIM24 RAD21 POLR2A RFX1 TRIM22 BMI1 ELF1 ZNF217 GNA14-AS1 PIR51881 GC09M077717 GNAQ
GH09J077424 Enhancer 0.5 Ensembl 11.6 -21.2 -21248 3.2 PKNOX1 CEBPA SOX5 NR2F6 VPS13A GNA14-AS1 GC09P077420 GNA14
GH09J077753 Enhancer 0.2 Ensembl 11.1 +306.2 306152 0.4 GNA14-AS1 PIR51881 GC09M077717 GNAQ
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GNA14-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GNA14-AS1 Gene

Genomic Locations for GNA14-AS1 Gene
chr9:77,447,649-77,526,762
(GRCh38/hg38)
Size:
79,114 bases
Orientation:
Plus strand
chr9:80,071,211-80,141,613
(GRCh37/hg19)
Size:
70,403 bases
Orientation:
Plus strand

Genomic View for GNA14-AS1 Gene

Genes around GNA14-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GNA14-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GNA14-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GNA14-AS1 Gene

Proteins for GNA14-AS1 Gene

Post-translational modifications for GNA14-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GNA14-AS1 Gene

Domains & Families for GNA14-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GNA14-AS1 Gene

Function for GNA14-AS1 Gene

Phenotypes From GWAS Catalog for GNA14-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GNA14-AS1 Gene

Localization for GNA14-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GNA14-AS1 Gene

Pathways & Interactions for GNA14-AS1 Gene

PathCards logo

SuperPathways for GNA14-AS1 Gene

No Data Available

Interacting Proteins for GNA14-AS1 Gene

Gene Ontology (GO) - Biological Process for GNA14-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GNA14-AS1 Gene

Drugs & Compounds for GNA14-AS1 Gene

No Compound Related Data Available

Transcripts for GNA14-AS1 Gene

mRNA/cDNA for GNA14-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for GNA14-AS1 Gene

No ASD Table

Relevant External Links for GNA14-AS1 Gene

GeneLoc Exon Structure for
GNA14-AS1
ECgene alternative splicing isoforms for
GNA14-AS1

Expression for GNA14-AS1 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GNA14-AS1 Gene

Orthologs for GNA14-AS1 Gene

Evolution for GNA14-AS1 Gene

ENSEMBL:
Gene Tree for GNA14-AS1 (if available)
TreeFam:
Gene Tree for GNA14-AS1 (if available)

No data available for Orthologs for GNA14-AS1 Gene

Paralogs for GNA14-AS1 Gene

No data available for Paralogs for GNA14-AS1 Gene

Variants for GNA14-AS1 Gene

Sequence variations from dbSNP and Humsavar for GNA14-AS1 Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000035097 -- 77,514,766(+) A/G intron_variant
rs1000067730 -- 77,460,268(+) C/T intron_variant
rs1000112376 -- 77,476,614(+) C/T intron_variant
rs1000150549 -- 77,493,794(+) A/G intron_variant
rs1000183741 -- 77,493,546(+) T/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for GNA14-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2463816 CNV insertion 19546169
esv2562696 CNV insertion 19546169
esv26092 CNV loss 19812545
esv3306887 CNV mobile element insertion 20981092
esv3430887 CNV insertion 20981092
esv3573274 CNV loss 25503493
esv3573276 CNV loss 25503493
esv3620775 CNV loss 21293372
esv7342 OTHER inversion 19470904
nsv1036470 CNV loss 25217958
nsv1041647 CNV gain 25217958
nsv1051079 CNV gain 25217958
nsv1054297 CNV gain 25217958
nsv614730 CNV loss 21841781
nsv831629 CNV gain 17160897

Additional Variant Information for GNA14-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GNA14-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for GNA14-AS1 Gene

Disorders for GNA14-AS1 Gene

Additional Disease Information for GNA14-AS1

No disorders were found for GNA14-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GNA14-AS1 Gene

Publications for GNA14-AS1 Gene

  1. A genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis. (PMID: 23509962) Greliche N … Trégouët DA (BMC medical genetics 2013) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for GNA14-AS1 Gene

Sources for GNA14-AS1 Gene

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