Aliases for GLYATL1P2 Gene

Aliases for GLYATL1P2 Gene

  • Glycine-N-Acyltransferase Like 1 Pseudogene 2 2 3 5
  • Glycine-N-Acyltransferase-Like 1 Pseudogene 2 2

External Ids for GLYATL1P2 Gene

Previous GeneCards Identifiers for GLYATL1P2 Gene

  • GC11P058652

Summaries for GLYATL1P2 Gene

GeneCards Summary for GLYATL1P2 Gene

GLYATL1P2 (Glycine-N-Acyltransferase Like 1 Pseudogene 2) is a Pseudogene.

Additional gene information for GLYATL1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GLYATL1P2 Gene

Genomics for GLYATL1P2 Gene

GeneHancer (GH) Regulatory Elements for GLYATL1P2 Gene

Promoters and enhancers for GLYATL1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J058904 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE CraniofacialAtlas 8.2 +26.9 26914 2.4 CTCF ZNF121 SP1 SP7 ZSCAN21 PRDM1 ZNF680 PKNOX1 PRDM10 ZEB2 GLYATL1 GLYATL2 lnc-GLYATL1-3 GLYATL1P2
GH11J058900 Enhancer 0.6 ENCODE 8.3 +22.5 22527 0.9 NFYC ELF1 RAD21 SP1 CTCF ELF3 PKNOX1 REST SMC3 PBX2 CNTF STX3 GLYATL1 GLYATL1P2 GLYATL2 lnc-GLYAT-2
GH11J058888 Enhancer 0.5 Ensembl 0.4 +10.7 10699 0.4 HLF CEBPG CEBPA CEBPB NFIL3 FOXA3 lnc-GLYAT-2 lnc-GLYATL1-1 GLYATL1P2 GLYATL2
GH11J058893 Enhancer 0.2 Ensembl 0.4 +16.0 15999 0.2 lnc-GLYAT-2 GLYATL2 lnc-GLYATL1-1 GLYATL1P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GLYATL1P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GLYATL1P2 Gene

Genomic Locations for GLYATL1P2 Gene
chr11:58,878,302-58,893,460
(GRCh38/hg38)
Size:
15,159 bases
Orientation:
Plus strand
chr11:58,645,775-58,660,933
(GRCh37/hg19)
Size:
15,159 bases
Orientation:
Plus strand

Genomic View for GLYATL1P2 Gene

Genes around GLYATL1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GLYATL1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GLYATL1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GLYATL1P2 Gene

Proteins for GLYATL1P2 Gene

Post-translational modifications for GLYATL1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GLYATL1P2 Gene

Domains & Families for GLYATL1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GLYATL1P2 Gene

Function for GLYATL1P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GLYATL1P2 Gene

Localization for GLYATL1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GLYATL1P2 Gene

Pathways & Interactions for GLYATL1P2 Gene

PathCards logo

SuperPathways for GLYATL1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for GLYATL1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GLYATL1P2 Gene

Drugs & Compounds for GLYATL1P2 Gene

No Compound Related Data Available

Transcripts for GLYATL1P2 Gene

mRNA/cDNA for GLYATL1P2 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GLYATL1P2 Gene

No ASD Table

Relevant External Links for GLYATL1P2 Gene

GeneLoc Exon Structure for
GLYATL1P2
ECgene alternative splicing isoforms for
GLYATL1P2

Expression for GLYATL1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GLYATL1P2 Gene

mRNA differential expression in normal tissues according to GTEx for GLYATL1P2 Gene

This gene is overexpressed in Kidney - Cortex (x12.0) and Whole Blood (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of GLYATL1P2 Gene:

GLYATL1P2
genes like me logo Genes that share expression patterns with GLYATL1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GLYATL1P2 Gene

Orthologs for GLYATL1P2 Gene

Evolution for GLYATL1P2 Gene

ENSEMBL:
Gene Tree for GLYATL1P2 (if available)
TreeFam:
Gene Tree for GLYATL1P2 (if available)

No data available for Orthologs for GLYATL1P2 Gene

Paralogs for GLYATL1P2 Gene

No data available for Paralogs for GLYATL1P2 Gene

Variants for GLYATL1P2 Gene

Additional Variant Information for GLYATL1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GLYATL1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GLYATL1P2 Gene

Disorders for GLYATL1P2 Gene

Additional Disease Information for GLYATL1P2

No disorders were found for GLYATL1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GLYATL1P2 Gene

Publications for GLYATL1P2 Gene

  1. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 43 56
  2. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 43 56
  3. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 43 56
  4. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 43 56

Products for GLYATL1P2 Gene

Sources for GLYATL1P2 Gene