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Aliases for GK-IT1 Gene

Subcategory (RNA class) for GK-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GK-IT1 Gene

  • GK Intronic Transcript 1 2 3 5
  • GK Intronic Transcript 1 (Non-Protein Coding) 2 3

External Ids for GK-IT1 Gene

Previous GeneCards Identifiers for GK-IT1 Gene

  • GC00U933590

Summaries for GK-IT1 Gene

GeneCards Summary for GK-IT1 Gene

GK-IT1 (GK Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GK-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GK-IT1 Gene

Genomics for GK-IT1 Gene

GeneHancer (GH) Regulatory Elements for GK-IT1 Gene

Promoters and enhancers for GK-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ030672 Enhancer 0.6 ENCODE dbSUPER 650.7 +1.8 1768 2.4 PAF1 SSRP1 ZKSCAN8 GC0XM030661 GK-IT1 CXorf21 GK
GH0XJ030649 Enhancer 1.2 Ensembl ENCODE dbSUPER 6.4 -21.6 -21585 1.5 ELF3 FOXA2 RAD21 RARA ATF7 CREM IKZF2 MIXL1 NFKBIZ RXRA GK GK-IT1 GC0XP030630
GH0XJ030664 Enhancer 0.2 dbSUPER 0.4 -6.5 -6490 0.9 GC0XM030662 CXorf21 GK-IT1 GK GC0XM030661
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GK-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GK-IT1 Gene

Genomic Locations for GK-IT1 Gene
chrX:30,671,635-30,672,166
(GRCh38/hg38)
Size:
532 bases
Orientation:
Plus strand
chrX:30,689,752-30,690,283
(GRCh37/hg19)
Size:
532 bases
Orientation:
Plus strand

Genomic View for GK-IT1 Gene

Genes around GK-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GK-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GK-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for GK-IT1 Gene

Function for GK-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GK-IT1 Gene

Localization for GK-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GK-IT1 Gene

Pathways & Interactions for GK-IT1 Gene

SuperPathways for GK-IT1 Gene

No Data Available

Interacting Proteins for GK-IT1 Gene

Gene Ontology (GO) - Biological Process for GK-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GK-IT1 Gene

Drugs & Compounds for GK-IT1 Gene

No Compound Related Data Available

Transcripts for GK-IT1 Gene

mRNA/cDNA for GK-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GK-IT1 Gene

No ASD Table

Relevant External Links for GK-IT1 Gene

GeneLoc Exon Structure for
GK-IT1
ECgene alternative splicing isoforms for
GK-IT1

Expression for GK-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GK-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for GK-IT1 Gene

This gene is overexpressed in Whole Blood (x29.2) and Liver (x5.3).
genes like me logo Genes that share expression patterns with GK-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GK-IT1 Gene

Orthologs for GK-IT1 Gene

Evolution for GK-IT1 Gene

ENSEMBL:
Gene Tree for GK-IT1 (if available)
TreeFam:
Gene Tree for GK-IT1 (if available)

No data available for Orthologs for GK-IT1 Gene

Paralogs for GK-IT1 Gene

No data available for Paralogs for GK-IT1 Gene

Variants for GK-IT1 Gene

Additional Variant Information for GK-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GK-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GK-IT1 Gene

Disorders for GK-IT1 Gene

No disorders were found for GK-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GK-IT1 Gene

Publications for GK-IT1 Gene

No publications were found for GK-IT1 Gene.

Products for GK-IT1 Gene

Sources for GK-IT1 Gene

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