Aliases for GJA6P Gene

Aliases for GJA6P Gene

  • Gap Junction Protein Alpha 6, Pseudogene 2 3 5
  • Gap Junction Protein, Alpha 1, 43kDa Pseudogene 3
  • Gap Junction Protein, Alpha 6, Pseudogene 2
  • GJA6P 5

External Ids for GJA6P Gene

Previous GeneCards Identifiers for GJA6P Gene

  • GC0XU900854
  • GC0XP018464
  • GC0XP018554

Summaries for GJA6P Gene

GeneCards Summary for GJA6P Gene

GJA6P (Gap Junction Protein Alpha 6, Pseudogene) is a Pseudogene.

Additional gene information for GJA6P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GJA6P Gene

Genomics for GJA6P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GJA6P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ018535 Enhancer 0.2 Ensembl 600.7 +1.1 1135 0.8 GJA6P RF00487-003 lnc-PPEF1-5 CDKL5 RS1
GH0XJ018522 Enhancer 0.3 Ensembl 0.4 -11.4 -11366 2.2 CEBPB GJA6P piR-57801-029 CDKL5 RS1
GH0XJ018501 Promoter 0.3 EPDnew 0.3 -33.3 -33315 0.1 CDKL5 piR-57801-029 GJA6P RS1
GH0XJ018491 Enhancer 0.3 Ensembl 0.3 -43.7 -43667 0.8 NR2F2 piR-57801-029 piR-57460-698 GJA6P CDKL5 RS1
GH0XJ018525 Enhancer 0.2 Ensembl 0.4 -9.7 -9665 0.4 GJA6P piR-57801-029 CDKL5 RS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GJA6P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GJA6P Gene

Genomic Locations for GJA6P Gene
chrX:18,534,866-18,536,120
(GRCh38/hg38)
Size:
1,255 bases
Orientation:
Plus strand
chrX:18,553,158-18,554,260
(GRCh37/hg19)
Size:
1,103 bases
Orientation:
Plus strand

Genomic View for GJA6P Gene

Genes around GJA6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GJA6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GJA6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GJA6P Gene

Proteins for GJA6P Gene

No data available for DME Specific Peptides for GJA6P Gene

Domains & Families for GJA6P Gene

Gene Families for GJA6P Gene

genes like me logo Genes that share domains with GJA6P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GJA6P Gene

Function for GJA6P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GJA6P Gene

Localization for GJA6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GJA6P Gene

Pathways & Interactions for GJA6P Gene

PathCards logo

SuperPathways for GJA6P Gene

No Data Available

Gene Ontology (GO) - Biological Process for GJA6P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GJA6P Gene

Drugs & Compounds for GJA6P Gene

No Compound Related Data Available

Transcripts for GJA6P Gene

mRNA/cDNA for GJA6P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GJA6P Gene

No ASD Table

Relevant External Links for GJA6P Gene

GeneLoc Exon Structure for
GJA6P

Expression for GJA6P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GJA6P Gene

genes like me logo Genes that share expression patterns with GJA6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GJA6P Gene

Orthologs for GJA6P Gene

Evolution for GJA6P Gene

ENSEMBL:
Gene Tree for GJA6P (if available)
TreeFam:
Gene Tree for GJA6P (if available)

No data available for Orthologs for GJA6P Gene

Paralogs for GJA6P Gene

No data available for Paralogs for GJA6P Gene

Variants for GJA6P Gene

Additional Variant Information for GJA6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GJA6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GJA6P Gene

Disorders for GJA6P Gene

No disorders were found for GJA6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GJA6P Gene

Publications for GJA6P Gene

  1. Connexin 33: a rodent-specific member of the gap junction protein family? (PMID: 15611570) Fischer P … Bergmann M (Journal of andrology 2005) 2 3

Products for GJA6P Gene

Sources for GJA6P Gene