Aliases for GGTLC5P Gene

Aliases for GGTLC5P Gene

  • Gamma-Glutamyltransferase Light Chain 5 Pseudogene 2 3 5
  • GGTLC5P 5
  • GGT 3

External Ids for GGTLC5P Gene

Previous GeneCards Identifiers for GGTLC5P Gene

  • GC22P018943
  • GC22P020611

Summaries for GGTLC5P Gene

GeneCards Summary for GGTLC5P Gene

GGTLC5P (Gamma-Glutamyltransferase Light Chain 5 Pseudogene) is a Pseudogene.

Additional gene information for GGTLC5P Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GGTLC5P Gene

Genomics for GGTLC5P Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for GGTLC5P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J018339 Enhancer 0.2 Ensembl 600.7 -0.6 -644 0.2 GGTLC5P piR-60290-002 LOC105379518 FAM247B USP18
GH22J018346 Enhancer 0.2 Ensembl 0.4 +6.2 6187 0.7 piR-48049-049 GGTLC5P piR-60290-002 FAM247B USP18
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GGTLC5P on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for GGTLC5P Gene

Genomic Locations for GGTLC5P Gene
chr22:18,340,145-18,346,065
(GRCh38/hg38)
Size:
5,921 bases
Orientation:
Plus strand
chr22:20,610,447-20,616,367
(GRCh37/hg19)
Size:
5,921 bases
Orientation:
Plus strand

Genomic View for GGTLC5P Gene

Genes around GGTLC5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GGTLC5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GGTLC5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GGTLC5P Gene

Proteins for GGTLC5P Gene

Post-translational modifications for GGTLC5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for GGTLC5P Gene

Domains & Families for GGTLC5P Gene

Gene Families for GGTLC5P Gene

genes like me logo Genes that share domains with GGTLC5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GGTLC5P Gene

Function for GGTLC5P Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GGTLC5P Gene

Localization for GGTLC5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GGTLC5P Gene

Pathways & Interactions for GGTLC5P Gene

PathCards logo

SuperPathways for GGTLC5P Gene

No Data Available

Gene Ontology (GO) - Biological Process for GGTLC5P Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GGTLC5P Gene

Drugs & Compounds for GGTLC5P Gene

No Compound Related Data Available

Transcripts for GGTLC5P Gene

mRNA/cDNA for GGTLC5P Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for GGTLC5P Gene

No ASD Table

Relevant External Links for GGTLC5P Gene

GeneLoc Exon Structure for
GGTLC5P

Expression for GGTLC5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for GGTLC5P Gene

mRNA expression in normal human tissues for GGTLC5P Gene

mRNA differential expression in normal tissues according to GTEx for GGTLC5P Gene

This gene is overexpressed in Kidney - Cortex (x26.1) and Thyroid (x16.8).
genes like me logo Genes that share expression patterns with GGTLC5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GGTLC5P Gene

Orthologs for GGTLC5P Gene

Evolution for GGTLC5P Gene

ENSEMBL:
Gene Tree for GGTLC5P (if available)
TreeFam:
Gene Tree for GGTLC5P (if available)

No data available for Orthologs for GGTLC5P Gene

Paralogs for GGTLC5P Gene

No data available for Paralogs for GGTLC5P Gene

Variants for GGTLC5P Gene

Additional Variant Information for GGTLC5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GGTLC5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GGTLC5P Gene

Disorders for GGTLC5P Gene

No disorders were found for GGTLC5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GGTLC5P Gene

Publications for GGTLC5P Gene

  1. The human gamma-glutamyltransferase gene family. (PMID: 18357469) Heisterkamp N … Sneddon TP (Human genetics 2008) 2 3
  2. Expression of multiple gamma-glutamyltransferase genes in man. (PMID: 7906515) Courtay C … Groffen J (The Biochemical journal 1994) 3
  3. Cloning and nucleotide sequence of human gamma-glutamyl transpeptidase. (PMID: 2904146) Rajpert-De Meyts E … Groffen J (Proceedings of the National Academy of Sciences of the United States of America 1988) 3

Products for GGTLC5P Gene

Sources for GGTLC5P Gene