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Aliases for GFOD1-AS1 Gene

Subcategory (RNA class) for GFOD1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for GFOD1-AS1 Gene

  • GFOD1 Antisense RNA 1 2 3 5
  • GFOD1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for GFOD1-AS1 Gene

Previous GeneCards Identifiers for GFOD1-AS1 Gene

  • GC00U933049

Summaries for GFOD1-AS1 Gene

GeneCards Summary for GFOD1-AS1 Gene

GFOD1-AS1 (GFOD1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GFOD1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GFOD1-AS1 Gene

Genomics for GFOD1-AS1 Gene

GeneHancer (GH) Regulatory Elements for GFOD1-AS1 Gene

Promoters and enhancers for GFOD1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I013483 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 -0.2 -204 5.2 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A IRF4 YY1 ZNF766 GFOD1 GFOD1-AS1 SIRT5 GC06M013422
GH06I013394 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.9 -89.5 -89457 4.1 PKNOX1 SMAD1 ARNT FEZF1 IRF4 ZNF766 E2F8 MEF2D ZNF610 SMARCA4 GFOD1 GFOD1-AS1 SIRT5 TBC1D7 PIR51588 GC06P013360 GC06M013385
GH06I013453 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -31.4 -31426 2.8 HDGF ATF1 PKNOX1 CLOCK ZNF766 ELK1 FOS ATF7 RUNX3 RXRA GFOD1 GFOD1-AS1 SIRT5 TBC1D7 RANBP9 GC06M013385 GC06M013422
GH06I013424 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -55.7 -55711 11.2 HDGF PKNOX1 ATF1 FOXA2 SMAD1 FEZF1 IRF4 ZNF280A ZNF121 ZNF207 GFOD1 TBC1D7 GFOD1-AS1 SIRT5 RANBP9 GC06M013385 GC06M013422 GC06P013360 PIR51588
GH06I013403 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11 -80.0 -79967 4.9 FOXA2 ARNT ARID4B FEZF1 DMAP1 YY1 ZNF766 ZNF143 FOS DEK GFOD1 GFOD1-AS1 SIRT5 RANBP9 PIR51588 GC06M013385 GC06P013360
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GFOD1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GFOD1-AS1 Gene

Genomic Locations for GFOD1-AS1 Gene
chr6:13,486,294-13,486,852
(GRCh38/hg38)
Size:
559 bases
Orientation:
Plus strand
chr6:13,486,526-13,487,084
(GRCh37/hg19)

Genomic View for GFOD1-AS1 Gene

Genes around GFOD1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GFOD1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GFOD1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for GFOD1-AS1 Gene

Proteins for GFOD1-AS1 Gene

Post-translational modifications for GFOD1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GFOD1-AS1 Gene

Domains & Families for GFOD1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GFOD1-AS1 Gene

Function for GFOD1-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GFOD1-AS1 Gene

Localization for GFOD1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GFOD1-AS1 Gene

Pathways & Interactions for GFOD1-AS1 Gene

SuperPathways for GFOD1-AS1 Gene

No Data Available

Interacting Proteins for GFOD1-AS1 Gene

Gene Ontology (GO) - Biological Process for GFOD1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GFOD1-AS1 Gene

Drugs & Compounds for GFOD1-AS1 Gene

No Compound Related Data Available

Transcripts for GFOD1-AS1 Gene

mRNA/cDNA for GFOD1-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GFOD1-AS1 Gene

No ASD Table

Relevant External Links for GFOD1-AS1 Gene

GeneLoc Exon Structure for
GFOD1-AS1
ECgene alternative splicing isoforms for
GFOD1-AS1

Expression for GFOD1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GFOD1-AS1 Gene

genes like me logo Genes that share expression patterns with GFOD1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GFOD1-AS1 Gene

Orthologs for GFOD1-AS1 Gene

Evolution for GFOD1-AS1 Gene

ENSEMBL:
Gene Tree for GFOD1-AS1 (if available)
TreeFam:
Gene Tree for GFOD1-AS1 (if available)

No data available for Orthologs for GFOD1-AS1 Gene

Paralogs for GFOD1-AS1 Gene

No data available for Paralogs for GFOD1-AS1 Gene

Variants for GFOD1-AS1 Gene

Additional Variant Information for GFOD1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GFOD1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GFOD1-AS1 Gene

Disorders for GFOD1-AS1 Gene

No disorders were found for GFOD1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GFOD1-AS1 Gene

Publications for GFOD1-AS1 Gene

No publications were found for GFOD1-AS1 Gene.

Products for GFOD1-AS1 Gene

Sources for GFOD1-AS1 Gene

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