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Aliases for GEMIN7-AS1 Gene

Subcategory (RNA class) for GEMIN7-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for GEMIN7-AS1 Gene

  • GEMIN7 Antisense RNA 1 2 3 5
  • CTB-179K24.3 3

External Ids for GEMIN7-AS1 Gene

Summaries for GEMIN7-AS1 Gene

GeneCards Summary for GEMIN7-AS1 Gene

GEMIN7-AS1 (GEMIN7 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for GEMIN7-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GEMIN7-AS1 Gene

Genomics for GEMIN7-AS1 Gene

GeneHancer (GH) Regulatory Elements for GEMIN7-AS1 Gene

Promoters and enhancers for GEMIN7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J045089 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 5.5 -2.0 -2002 5.3 CLOCK ZFP64 FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 PPP1R37 ZNF180 ZNF225 ZNF224 ZNF234 CCDC61 GEMIN7 ZNF235 ZNF227 CLASRP
GH19J045096 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 5.3 -11.0 -11006 9.7 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 FOS ZNF263 MXD4 REST KAT8 GC19M045094 GEMIN7 CLASRP ZNF225 MRPS15P2 ZNF180 CCDC61 FOSB ZNF296 PPP1R37
GH19J045112 Enhancer 1.1 Ensembl ENCODE dbSUPER 5.6 -23.1 -23080 2.5 CTCF KLF1 FOXA2 SAP130 ARID4B SIN3A ZFHX2 GATA3 SCRT2 EGR2 GEMIN7 PPP1R37 GEMIN7-AS1 PIR57496 GC19M045094 MARK4
GH19J045109 Enhancer 0.3 dbSUPER 5.6 -19.2 -19244 0.9 EMSY GEMIN7 ZNF296 CLASRP RELB EIF5AP3 GEMIN7-AS1 GC19M045094 PIR57496 PPP1R37 MARK4
GH19J045078 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +10.6 10581 2.7 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 IRF4 YY1 GEMIN7 MARK4 ZNF227 ZNF225 ZNF180 ZNF235 IRF2BP1 CLASRP CCDC61 ENSG00000267114
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GEMIN7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GEMIN7-AS1 Gene

Genomic Locations for GEMIN7-AS1 Gene
chr19:45,076,510-45,090,391
(GRCh38/hg38)
Size:
13,882 bases
Orientation:
Minus strand
chr19:45,579,768-45,593,649
(GRCh37/hg19)
Size:
13,882 bases
Orientation:
Minus strand

Genomic View for GEMIN7-AS1 Gene

Genes around GEMIN7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GEMIN7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GEMIN7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GEMIN7-AS1 Gene

Proteins for GEMIN7-AS1 Gene

Post-translational modifications for GEMIN7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GEMIN7-AS1 Gene

Domains & Families for GEMIN7-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GEMIN7-AS1 Gene

Function for GEMIN7-AS1 Gene

Phenotypes From GWAS Catalog for GEMIN7-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GEMIN7-AS1 Gene

Localization for GEMIN7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GEMIN7-AS1 Gene

Pathways & Interactions for GEMIN7-AS1 Gene

SuperPathways for GEMIN7-AS1 Gene

No Data Available

Interacting Proteins for GEMIN7-AS1 Gene

Gene Ontology (GO) - Biological Process for GEMIN7-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GEMIN7-AS1 Gene

Drugs & Compounds for GEMIN7-AS1 Gene

No Compound Related Data Available

Transcripts for GEMIN7-AS1 Gene

mRNA/cDNA for GEMIN7-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GEMIN7-AS1 Gene

No ASD Table

Relevant External Links for GEMIN7-AS1 Gene

GeneLoc Exon Structure for
GEMIN7-AS1
ECgene alternative splicing isoforms for
GEMIN7-AS1

Expression for GEMIN7-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GEMIN7-AS1 Gene

Orthologs for GEMIN7-AS1 Gene

Evolution for GEMIN7-AS1 Gene

ENSEMBL:
Gene Tree for GEMIN7-AS1 (if available)
TreeFam:
Gene Tree for GEMIN7-AS1 (if available)

No data available for Orthologs for GEMIN7-AS1 Gene

Paralogs for GEMIN7-AS1 Gene

No data available for Paralogs for GEMIN7-AS1 Gene

Variants for GEMIN7-AS1 Gene

Sequence variations from dbSNP and Humsavar for GEMIN7-AS1 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000612333 -- 45,089,514(-) G/C intron_variant
rs1001589249 -- 45,086,482(-) A/G intron_variant
rs1001634573 -- 45,089,009(-) T/G intron_variant
rs1001938827 -- 45,088,724(-) T/C intron_variant
rs1002190181 -- 45,087,593(-) G/A intron_variant

Additional Variant Information for GEMIN7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GEMIN7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GEMIN7-AS1 Gene

Disorders for GEMIN7-AS1 Gene

No disorders were found for GEMIN7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GEMIN7-AS1 Gene

Publications for GEMIN7-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for GEMIN7-AS1 Gene

Sources for GEMIN7-AS1 Gene

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