Aliases for GEMIN7-AS1 Gene

Subcategory (RNA class) for GEMIN7-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for GEMIN7-AS1 Gene

  • GEMIN7 Antisense RNA 1 2 3 5
  • GEMIN7-AS1 2 168
  • HSALNG0126529 167
  • NONHSAG026020 92
  • CTB-179K24.3 3

External Ids for GEMIN7-AS1 Gene

Summaries for GEMIN7-AS1 Gene

GeneCards Summary for GEMIN7-AS1 Gene

GEMIN7-AS1 (GEMIN7 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GEMIN7-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GEMIN7-AS1 Gene

Genomics for GEMIN7-AS1 Gene

GeneHancer (GH) Regulatory Elements for GEMIN7-AS1 Gene

Promoters and enhancers for GEMIN7-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J045089 Promoter/Enhancer 2.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 505.4 +0.1 56 6 RXRA ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 TCF12 POLR2G USF1 PPP1R37 GEMIN7-AS1 lnc-GEMIN7-1 GEMIN7 ZNF227 ZNF235 ENSG00000267114 ZNF226 ZNF180 IRF2BP1
GH19J045096 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 5.3 -8.5 -8486 9.8 ZNF217 TCF12 POLR2G USF1 NCOR1 JUND FOS ZIC2 KDM6A ZNF263 GEMIN7 ENSG00000270679 FOSB ZNF296 PPP1R37 RELB CLASRP ZNF225 NKPD1 GEMIN7-AS1
GH19J045112 Enhancer 0.8 ENCODE dbSUPER 5.6 -20.6 -20638 2.5 ZNF217 CLOCK KLF4 SIN3A CTCF SAP130 SPI1 ZFHX2 KLF9 FOXA1 GEMIN7 PPP1R37 GEMIN7-AS1 piR-34451 MARK4
GH19J045109 Enhancer 0.3 dbSUPER 5.6 -16.8 -16802 0.9 NFE2L2 EMSY GEMIN7 ZNF296 CLASRP RELB EIF5AP3 GEMIN7-AS1 piR-34451 PPP1R37 MARK4
GH19J045074 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +15.1 15063 6.8 RXRA HNRNPK ZBTB40 ZNF217 EP300 ZSCAN5C SIN3A MYC TCF12 POLR2G GEMIN7 MARK4 ZNF296 lnc-MARK4-1 ZNF225 ZNF227 ZNF226 IRF2BP1 ZNF112 ZNF235
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GEMIN7-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GEMIN7-AS1 Gene

Genomic Locations for GEMIN7-AS1 Gene
chr19:45,076,510-45,092,833
(GRCh38/hg38)
Size:
16,324 bases
Orientation:
Minus strand
chr19:45,579,768-45,593,649
(GRCh37/hg19)
Size:
13,882 bases
Orientation:
Minus strand

Genomic View for GEMIN7-AS1 Gene

Genes around GEMIN7-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GEMIN7-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GEMIN7-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GEMIN7-AS1 Gene

Proteins for GEMIN7-AS1 Gene

Post-translational modifications for GEMIN7-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GEMIN7-AS1 Gene

Domains & Families for GEMIN7-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GEMIN7-AS1 Gene

Function for GEMIN7-AS1 Gene

Phenotypes From GWAS Catalog for GEMIN7-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GEMIN7-AS1 Gene

Localization for GEMIN7-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GEMIN7-AS1 Gene

Pathways & Interactions for GEMIN7-AS1 Gene

PathCards logo

SuperPathways for GEMIN7-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for GEMIN7-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GEMIN7-AS1 Gene

Drugs & Compounds for GEMIN7-AS1 Gene

No Compound Related Data Available

Transcripts for GEMIN7-AS1 Gene

mRNA/cDNA for GEMIN7-AS1 Gene

15 RNACentral transcripts :
1 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
6 NONCODE transcripts :
6 LncBook transcripts :
10 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for GEMIN7-AS1 Gene

No ASD Table

Relevant External Links for GEMIN7-AS1 Gene

GeneLoc Exon Structure for
GEMIN7-AS1

Expression for GEMIN7-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GEMIN7-AS1 Gene

Orthologs for GEMIN7-AS1 Gene

Evolution for GEMIN7-AS1 Gene

ENSEMBL:
Gene Tree for GEMIN7-AS1 (if available)
TreeFam:
Gene Tree for GEMIN7-AS1 (if available)

No data available for Orthologs for GEMIN7-AS1 Gene

Paralogs for GEMIN7-AS1 Gene

No data available for Paralogs for GEMIN7-AS1 Gene

Variants for GEMIN7-AS1 Gene

Additional dbSNP identifiers (rs#s) for GEMIN7-AS1 Gene

Additional Variant Information for GEMIN7-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GEMIN7-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GEMIN7-AS1 Gene

Disorders for GEMIN7-AS1 Gene

Additional Disease Information for GEMIN7-AS1

No disorders were found for GEMIN7-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GEMIN7-AS1 Gene

Publications for GEMIN7-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 54

No data available for Mastermind for GEMIN7-AS1 Gene

Products for GEMIN7-AS1 Gene

Sources for GEMIN7-AS1 Gene