Aliases for GDF5-AS1 Gene

Subcategory (RNA class) for GDF5-AS1 Gene

lncRNA

Aliases for GDF5-AS1 Gene

  • GDF5 Antisense RNA 1 2 3
  • Growth Differentiation Factor 5 Opposite Strand 2 3
  • Protein GDF5OS, Mitochondrial 3
  • GDF5OS 3

External Ids for GDF5-AS1 Gene

Previous HGNC Symbols for GDF5-AS1 Gene

  • GDF5OS

Summaries for GDF5-AS1 Gene

GeneCards Summary for GDF5-AS1 Gene

GDF5-AS1 (GDF5 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with GDF5-AS1 include Symphalangism, Proximal, 1B and Multiple Synostoses Syndrome 2.

Additional gene information for GDF5-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GDF5-AS1 Gene

Genomics for GDF5-AS1 Gene

Genomic Locations for GDF5-AS1 Gene

Genomic Locations for GDF5-AS1 Gene
chr20:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for GDF5-AS1 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for GDF5-AS1 Gene

No data available for GeneHancer (GH) Regulatory Elements for GDF5-AS1 Gene

Proteins for GDF5-AS1 Gene

Post-translational modifications for GDF5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GDF5-AS1 Gene

Domains & Families for GDF5-AS1 Gene

Gene Families for GDF5-AS1 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Suggested Antigen Peptide Sequences for GDF5-AS1 Gene

GenScript: Design optimal peptide antigens:
  • Growth/differentiation factor 5 opposite strand transcript protein (GDF5O_HUMAN)
genes like me logo Genes that share domains with GDF5-AS1: view

No data available for Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GDF5-AS1 Gene

Function for GDF5-AS1 Gene

Phenotypes From GWAS Catalog for GDF5-AS1 Gene

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GDF5-AS1 Gene

Localization for GDF5-AS1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for GDF5-AS1 gene
Compartment Confidence
mitochondrion 4
cytosol 1
extracellular 0
nucleus 0

Gene Ontology (GO) - Cellular Components for GDF5-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA --
genes like me logo Genes that share ontologies with GDF5-AS1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for GDF5-AS1 Gene

Pathways & Interactions for GDF5-AS1 Gene

PathCards logo

SuperPathways for GDF5-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for GDF5-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GDF5-AS1 Gene

Drugs & Compounds for GDF5-AS1 Gene

No Compound Related Data Available

Transcripts for GDF5-AS1 Gene

mRNA/cDNA for GDF5-AS1 Gene

2 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GDF5-AS1 Gene

No ASD Table

Expression for GDF5-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for GDF5-AS1

SOURCE GeneReport for Unigene cluster for GDF5-AS1 Gene:

Hs.711481
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GDF5-AS1 Gene

Orthologs for GDF5-AS1 Gene

No data available for Orthologs and Evolution for GDF5-AS1 Gene

Paralogs for GDF5-AS1 Gene

No data available for Paralogs for GDF5-AS1 Gene

Variants for GDF5-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for GDF5-AS1 Gene

SNP ID Clinical significance and condition Chr 20 pos Variation AA Info Type
695733 Benign: not provided 35,434,398( ) T/C NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT
695737 Benign: not provided 35,434,589( ) C/A MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT
697206 Benign: not provided 35,434,436( ) G/C MISSENSE_VARIANT,NON_CODING_TRANSCRIPT_VARIANT
697958 Likely Benign: not provided 35,434,386( ) C/T NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT
698371 Likely Benign: not provided 35,434,386( ) C/G NON_CODING_TRANSCRIPT_VARIANT,SYNONYMOUS_VARIANT

Additional dbSNP identifiers (rs#s) for GDF5-AS1 Gene

Variation tolerance for GDF5-AS1 Gene

Gene Damage Index Score: 9.74; 89.38% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for GDF5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GDF5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for GDF5-AS1 Gene

Disorders for GDF5-AS1 Gene

MalaCards: The human disease database

(8) MalaCards diseases for GDF5-AS1 Gene - From: GeneCards

- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for GDF5-AS1

genes like me logo Genes that share disorders with GDF5-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for GDF5-AS1 Gene

Publications for GDF5-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for GDF5-AS1 Gene

Sources for GDF5-AS1 Gene