Aliases for GCSHP3 Gene

Aliases for GCSHP3 Gene

  • Glycine Cleavage System Protein H Pseudogene 3 2 3 5
  • Glycine Cleavage System Protein H (Aminomethyl Carrier) Pseudogene 3 2 3

External Ids for GCSHP3 Gene

Previous GeneCards Identifiers for GCSHP3 Gene

  • GC02M206984
  • GC02M206990
  • GC02M206995

Summaries for GCSHP3 Gene

GeneCards Summary for GCSHP3 Gene

GCSHP3 (Glycine Cleavage System Protein H Pseudogene 3) is a Pseudogene.

Additional gene information for GCSHP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for GCSHP3 Gene

Genomics for GCSHP3 Gene

GeneHancer (GH) Regulatory Elements for GCSHP3 Gene

Promoters and enhancers for GCSHP3 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GCSHP3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GCSHP3 Gene

Genomic Locations for GCSHP3 Gene
chr2:206,115,573-206,116,572
(GRCh38/hg38)
Size:
1,000 bases
Orientation:
Minus strand
chr2:206,980,297-206,981,296
(GRCh37/hg19)
Size:
1,000 bases
Orientation:
Minus strand

Genomic View for GCSHP3 Gene

Genes around GCSHP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GCSHP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GCSHP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GCSHP3 Gene

Proteins for GCSHP3 Gene

Post-translational modifications for GCSHP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GCSHP3 Gene

Domains & Families for GCSHP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for GCSHP3 Gene

Function for GCSHP3 Gene

Phenotypes From GWAS Catalog for GCSHP3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GCSHP3 Gene

Localization for GCSHP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GCSHP3 Gene

Pathways & Interactions for GCSHP3 Gene

PathCards logo

SuperPathways for GCSHP3 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for GCSHP3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for GCSHP3 Gene

Drugs & Compounds for GCSHP3 Gene

No Compound Related Data Available

Transcripts for GCSHP3 Gene

mRNA/cDNA for GCSHP3 Gene

3 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GCSHP3 Gene

No ASD Table

Relevant External Links for GCSHP3 Gene

GeneLoc Exon Structure for
GCSHP3

Expression for GCSHP3 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for GCSHP3

SOURCE GeneReport for Unigene cluster for GCSHP3 Gene:

Hs.356055
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GCSHP3 Gene

Orthologs for GCSHP3 Gene

Evolution for GCSHP3 Gene

ENSEMBL:
Gene Tree for GCSHP3 (if available)
TreeFam:
Gene Tree for GCSHP3 (if available)

No data available for Orthologs for GCSHP3 Gene

Paralogs for GCSHP3 Gene

No data available for Paralogs for GCSHP3 Gene

Variants for GCSHP3 Gene

Structural Variations from Database of Genomic Variants (DGV) for GCSHP3 Gene

Variant ID Type Subtype PubMed ID
esv3893538 CNV loss 25118596
nsv979170 CNV duplication 23825009

Additional Variant Information for GCSHP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GCSHP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for GCSHP3 Gene

Disorders for GCSHP3 Gene

Additional Disease Information for GCSHP3

No disorders were found for GCSHP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GCSHP3 Gene

Publications for GCSHP3 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 54

Products for GCSHP3 Gene

Sources for GCSHP3 Gene