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Aliases for GCSHP2 Gene

Aliases for GCSHP2 Gene

  • Glycine Cleavage System Protein H Pseudogene 2 2 3 5
  • Glycine Cleavage System Protein H (Aminomethyl Carrier) Pseudogene 2 2 3

External Ids for GCSHP2 Gene

Previous GeneCards Identifiers for GCSHP2 Gene

  • GC14P103651

Summaries for GCSHP2 Gene

GeneCards Summary for GCSHP2 Gene

GCSHP2 (Glycine Cleavage System Protein H Pseudogene 2) is a Pseudogene.

Additional gene information for GCSHP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GCSHP2 Gene

Genomics for GCSHP2 Gene

GeneHancer (GH) Regulatory Elements for GCSHP2 Gene

Promoters and enhancers for GCSHP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J103185 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.7 +3.7 3686 4.9 PKNOX1 INSM2 ARID4B ZNF48 RAD21 YY1 ZNF335 ZNF614 ZNF143 RCOR1 LINC00605 TNFAIP2 EXOC3L4 GCSHP2 GC14M103156
GH14J103173 Enhancer 0.5 dbSUPER 0.4 -10.7 -10737 0.7 SMARCE1 ZNF217 CTBP1 GATA3 DPF2 CUX1 KLF4 LOC105370685 GCSHP2 GC14M103156
GH14J103169 Enhancer 0.5 dbSUPER 0.4 -14.1 -14104 1.4 SP1 NFIA RXRA SCRT2 HNF4G HNF4A TRIM28 TNFAIP2 LOC105370685 GCSHP2 GC14M103156
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GCSHP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GCSHP2 Gene

Genomic Locations for GCSHP2 Gene
chr14:103,184,204-103,185,071
(GRCh38/hg38)
Size:
868 bases
Orientation:
Plus strand
chr14:103,650,541-103,651,408
(GRCh37/hg19)
Size:
868 bases
Orientation:
Plus strand

Genomic View for GCSHP2 Gene

Genes around GCSHP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GCSHP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GCSHP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GCSHP2 Gene

Function for GCSHP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GCSHP2 Gene

Localization for GCSHP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GCSHP2 Gene

Pathways & Interactions for GCSHP2 Gene

SuperPathways for GCSHP2 Gene

No Data Available

Interacting Proteins for GCSHP2 Gene

Gene Ontology (GO) - Biological Process for GCSHP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GCSHP2 Gene

Drugs & Compounds for GCSHP2 Gene

No Compound Related Data Available

Transcripts for GCSHP2 Gene

mRNA/cDNA for GCSHP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GCSHP2 Gene

No ASD Table

Relevant External Links for GCSHP2 Gene

GeneLoc Exon Structure for
GCSHP2
ECgene alternative splicing isoforms for
GCSHP2

Expression for GCSHP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GCSHP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of GCSHP2 Gene:

GCSHP2
genes like me logo Genes that share expression patterns with GCSHP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GCSHP2 Gene

Orthologs for GCSHP2 Gene

Evolution for GCSHP2 Gene

ENSEMBL:
Gene Tree for GCSHP2 (if available)
TreeFam:
Gene Tree for GCSHP2 (if available)

No data available for Orthologs for GCSHP2 Gene

Paralogs for GCSHP2 Gene

No data available for Paralogs for GCSHP2 Gene

Variants for GCSHP2 Gene

Additional Variant Information for GCSHP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GCSHP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GCSHP2 Gene

Disorders for GCSHP2 Gene

No disorders were found for GCSHP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GCSHP2 Gene

Publications for GCSHP2 Gene

No publications were found for GCSHP2 Gene.

Products for GCSHP2 Gene

Sources for GCSHP2 Gene

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