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Aliases for GCSHP1 Gene

Subcategory (RNA class) for GCSHP1 Gene


Aliases for GCSHP1 Gene

  • Glycine Cleavage System Protein H Pseudogene 1 2 3 5
  • Glycine Cleavage System Protein H (Aminomethyl Carrier) Pseudogene 1 2 3

External Ids for GCSHP1 Gene

ORGUL Members for GCSHP1 Gene

Summaries for GCSHP1 Gene

GeneCards Summary for GCSHP1 Gene

GCSHP1 (Glycine Cleavage System Protein H Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GCSHP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GCSHP1 Gene

Genomics for GCSHP1 Gene

GeneHancer (GH) Regulatory Elements for GCSHP1 Gene

Promoters and enhancers for GCSHP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J039759 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.1 +128.2 128156 3.6 JUN MAX RAD21 RFX5 GTF3C2 POLR2A RCOR1 FOS RUNX3 TCF7L2 LINC02104 OSMR-AS1 INTS6P1 GCSHP1 GC05M039678
GH05J039755 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.1 +132.7 132716 2.6 JUN BACH1 RFX5 FOSL1 ZNF316 GATA3 TRIM24 FOSL2 NFE2 FOS LINC02104 INTS6P1 GCSHP1 GC05M039678
GH05J039774 Enhancer 1 Ensembl ENCODE dbSUPER 0.1 +113.4 113406 1.6 JUND SMARCC1 MAFF JUN STAT3 CEBPB FOS EP300 INTS6P1 GCSHP1 GC05M039678
GH05J039793 Enhancer 0.2 ENCODE 0.2 +94.3 94269 1.9 LINC02104 INTS6P1 GCSHP1 GC05M039678
GH05J039765 Enhancer 0.4 ENCODE dbSUPER 0.1 +123.5 123485 0.2 INTS6P1 GCSHP1 GC05M039678
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GCSHP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GCSHP1 Gene

Genomic Locations for GCSHP1 Gene
484 bases
Minus strand
484 bases
Minus strand

Genomic View for GCSHP1 Gene

Genes around GCSHP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GCSHP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GCSHP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GCSHP1 Gene

Function for GCSHP1 Gene

Phenotypes From GWAS Catalog for GCSHP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GCSHP1 Gene

Localization for GCSHP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GCSHP1 Gene

Pathways & Interactions for GCSHP1 Gene

SuperPathways for GCSHP1 Gene

No Data Available

Interacting Proteins for GCSHP1 Gene

Gene Ontology (GO) - Biological Process for GCSHP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for GCSHP1 Gene

Drugs & Compounds for GCSHP1 Gene

No Compound Related Data Available

Transcripts for GCSHP1 Gene

mRNA/cDNA for GCSHP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for GCSHP1 Gene

No ASD Table

Relevant External Links for GCSHP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for GCSHP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GCSHP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of GCSHP1 Gene:

genes like me logo Genes that share expression patterns with GCSHP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GCSHP1 Gene

Orthologs for GCSHP1 Gene

Evolution for GCSHP1 Gene

Gene Tree for GCSHP1 (if available)
Gene Tree for GCSHP1 (if available)

No data available for Orthologs for GCSHP1 Gene

Paralogs for GCSHP1 Gene

No data available for Paralogs for GCSHP1 Gene

Variants for GCSHP1 Gene

Additional Variant Information for GCSHP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GCSHP1 Gene

Disorders for GCSHP1 Gene

No disorders were found for GCSHP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GCSHP1 Gene

Publications for GCSHP1 Gene

No publications were found for GCSHP1 Gene.

Products for GCSHP1 Gene

Sources for GCSHP1 Gene

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