Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GCNT1P3 Gene

Subcategory (RNA class) for GCNT1P3 Gene

lncRNA

Aliases for GCNT1P3 Gene

  • Glucosaminyl (N-Acetyl) Transferase 1, Core 2 Pseudogene 3 2 3 5

External Ids for GCNT1P3 Gene

ORGUL Members for GCNT1P3 Gene

Previous GeneCards Identifiers for GCNT1P3 Gene

  • GC00U930844
  • GC03U901566
  • GC03P187742
  • GC03P190343

Summaries for GCNT1P3 Gene

GeneCards Summary for GCNT1P3 Gene

GCNT1P3 (Glucosaminyl (N-Acetyl) Transferase 1, Core 2 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for GCNT1P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GCNT1P3 Gene

Genomics for GCNT1P3 Gene

GeneHancer (GH) Regulatory Elements for GCNT1P3 Gene

Promoters and enhancers for GCNT1P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I190616 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.8 -6834 3.3 CTCF ELF3 PKNOX1 MXI1 FOXA2 SAP130 CEBPG BMI1 ZNF644 TEAD3 IL1RAP GCNT1P3
GH03I190584 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -38.2 -38211 3.3 PKNOX1 NEUROD1 SIN3A BRCA1 FOS SP3 RXRA REST TSHZ1 STAT3 GCNT1P3 IL1RAP
GH03I190530 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -91.1 -91130 5.5 FOXA2 ARID4B RXRA SP5 MIER2 PPARG NFIL3 MIER3 RCOR2 ETV4 IL1RAP OSTN CLDN1 GCNT1P3
GH03I190565 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.2 -57.7 -57722 3.1 FOXA2 ARNT MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 IL1RAP GCNT1P3
GH03I190512 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 0.1 -109.0 -108977 5.5 FOXA2 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF207 ZNF143 FOS IL1RAP TMEM207 CCDC50 GC03P190507 GCNT1P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GCNT1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GCNT1P3 Gene

Genomic Locations for GCNT1P3 Gene
chr3:190,624,595-190,625,169
(GRCh38/hg38)
Size:
575 bases
Orientation:
Plus strand
chr3:190,342,384-190,342,958
(GRCh37/hg19)

Genomic View for GCNT1P3 Gene

Genes around GCNT1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GCNT1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GCNT1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GCNT1P3 Gene

Proteins for GCNT1P3 Gene

Post-translational modifications for GCNT1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GCNT1P3 Gene

Domains & Families for GCNT1P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GCNT1P3 Gene

Function for GCNT1P3 Gene

Phenotypes From GWAS Catalog for GCNT1P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GCNT1P3 Gene

Localization for GCNT1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GCNT1P3 Gene

Pathways & Interactions for GCNT1P3 Gene

SuperPathways for GCNT1P3 Gene

No Data Available

Interacting Proteins for GCNT1P3 Gene

Gene Ontology (GO) - Biological Process for GCNT1P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GCNT1P3 Gene

Drugs & Compounds for GCNT1P3 Gene

No Compound Related Data Available

Transcripts for GCNT1P3 Gene

mRNA/cDNA for GCNT1P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GCNT1P3 Gene

No ASD Table

Relevant External Links for GCNT1P3 Gene

GeneLoc Exon Structure for
GCNT1P3
ECgene alternative splicing isoforms for
GCNT1P3

Expression for GCNT1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GCNT1P3 Gene

mRNA differential expression in normal tissues according to GTEx for GCNT1P3 Gene

This gene is overexpressed in Liver (x12.2) and Whole Blood (x7.0).

NURSA nuclear receptor signaling pathways regulating expression of GCNT1P3 Gene:

GCNT1P3
genes like me logo Genes that share expression patterns with GCNT1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GCNT1P3 Gene

Orthologs for GCNT1P3 Gene

Evolution for GCNT1P3 Gene

ENSEMBL:
Gene Tree for GCNT1P3 (if available)
TreeFam:
Gene Tree for GCNT1P3 (if available)

No data available for Orthologs for GCNT1P3 Gene

Paralogs for GCNT1P3 Gene

No data available for Paralogs for GCNT1P3 Gene

Variants for GCNT1P3 Gene

Additional Variant Information for GCNT1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GCNT1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GCNT1P3 Gene

Disorders for GCNT1P3 Gene

No disorders were found for GCNT1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GCNT1P3 Gene

Publications for GCNT1P3 Gene

No publications were found for GCNT1P3 Gene.

Products for GCNT1P3 Gene

Sources for GCNT1P3 Gene

Content
Loading form....