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Aliases for GCATP1 Gene

Aliases for GCATP1 Gene

  • Glycine C-Acetyltransferase Pseudogene 1 2 3
  • Glycine C-Acetyltransferase Pseudogene 2
  • AL136038.4 5
  • GCATP 3

External Ids for GCATP1 Gene

Previous HGNC Symbols for GCATP1 Gene

  • GCATP

Previous GeneCards Identifiers for GCATP1 Gene

  • GC14M064061
  • GC14M044227

Summaries for GCATP1 Gene

GeneCards Summary for GCATP1 Gene

GCATP1 (Glycine C-Acetyltransferase Pseudogene 1) is a Pseudogene.

Additional gene information for GCATP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GCATP1 Gene

Genomics for GCATP1 Gene

GeneHancer (GH) Regulatory Elements for GCATP1 Gene

Promoters and enhancers for GCATP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I064538 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 11.1 -945.4 -945421 4.9 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A BRCA1 ZNF48 YY1 GLIS2 LOC102723809 HSPA2 ZBTB25 ZBTB1 PPP1R36 ENSG00000214770 GCATP1 WDR89 SYNE2 PLEKHG3
GH14I063639 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE 4.7 -46.5 -46469 3.7 HDGF PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 WDR89 LOC105370532 ZBTB1 LOC102723809 GCATP1 SYNE2 RNU6-1162P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GCATP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GCATP1 Gene

Genomic Locations for GCATP1 Gene
chr14:63,593,852-63,595,326
(GRCh38/hg38)
Size:
1,475 bases
Orientation:
Minus strand
chr14:64,060,570-64,062,044
(GRCh37/hg19)

Genomic View for GCATP1 Gene

Genes around GCATP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GCATP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GCATP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GCATP1 Gene

Proteins for GCATP1 Gene

Post-translational modifications for GCATP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GCATP1 Gene

Domains & Families for GCATP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GCATP1 Gene

Function for GCATP1 Gene

Phenotypes From GWAS Catalog for GCATP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GCATP1 Gene

Localization for GCATP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GCATP1 Gene

Pathways & Interactions for GCATP1 Gene

SuperPathways for GCATP1 Gene

No Data Available

Interacting Proteins for GCATP1 Gene

Gene Ontology (GO) - Biological Process for GCATP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GCATP1 Gene

Drugs & Compounds for GCATP1 Gene

No Compound Related Data Available

Transcripts for GCATP1 Gene

mRNA/cDNA for GCATP1 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GCATP1 Gene

No ASD Table

Relevant External Links for GCATP1 Gene

GeneLoc Exon Structure for
GCATP1
ECgene alternative splicing isoforms for
GCATP1

Expression for GCATP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GCATP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of GCATP1 Gene:

GCATP1
genes like me logo Genes that share expression patterns with GCATP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GCATP1 Gene

Orthologs for GCATP1 Gene

Evolution for GCATP1 Gene

ENSEMBL:
Gene Tree for GCATP1 (if available)
TreeFam:
Gene Tree for GCATP1 (if available)

No data available for Orthologs for GCATP1 Gene

Paralogs for GCATP1 Gene

No data available for Paralogs for GCATP1 Gene

Variants for GCATP1 Gene

Additional Variant Information for GCATP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GCATP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for GCATP1 Gene

Disorders for GCATP1 Gene

No disorders were found for GCATP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GCATP1 Gene

Publications for GCATP1 Gene

No publications were found for GCATP1 Gene.

Products for GCATP1 Gene

Sources for GCATP1 Gene

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